Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017-
05-31] 370 sequences; 44,096,448 total letters
Query= NC_031465.1
Length=360610
Score E
Sequences producing significant alignments: (Bits) Value
seq15 145 2e-29
seq1 116 9e-21
>seq15
Length=1659866
Score = 145 bits (160), Expect = 2e-29
Identities = 160/210 (76%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956
|||| |||||||||||||| ||||||||||||||||||| | || | |||||||| |
Sbjct 675672 CAAG-TGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCGA 675614
Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014
| ||||| ||||||||||| | | ||| ||||| | | ||||| ||||| || ||
Sbjct 675613 GTTGCTTT--CCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCCTG 675556
Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074
|| || |||||| | || | | |||| ||| ||| || || || || || |||||
Sbjct 675555 GATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTTTT 675496
Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104
||||||||| ||||| ||||||| ||||||
Sbjct 675495 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466
>seq1
Length=3544467
Score = 116 bits (128), Expect = 9e-21
Identities = 153/210 (73%), Gaps = 4/210 (2%)
Strand=Plus/Plus
Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946
||||||||||| | ||||| ||||||||||| ||||| || ||||||| | || |
Sbjct 2378097 AGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGA 2378156
Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004
|||||||| || ||||| |||||||| || | | ||| ||||| | | || ||||
Sbjct 2378157 CCATCTTCCAGTTGCTTT--CCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTT 2378214
Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064
|||| |||||||| || || || | || | | |||||||| || || ||||| |
Sbjct 2378215 CCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGG 2378274
Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094
| || || || || || |||||||| ||||
Sbjct 2378275 TGATGGTCTTTCCGGTAAGAGTCTTAACGA 2378304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1153815330168270
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |