Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq15 145 2e-29 seq1 116 9e-21 >seq15 Length=1659866 Score = 145 bits (160), Expect = 2e-29 Identities = 160/210 (76%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||||||||| ||||||||||||||||||| | || | |||||||| | Sbjct 675672 CAAG-TGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGACCATCTTCGA 675614 Query 151957 G--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 | ||||| ||||||||||| | | ||| ||||| | | ||||| ||||| || || Sbjct 675613 GTTGCTTT--CCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCCTG 675556 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || |||||| | || | | |||| ||| ||| || || || || || ||||| Sbjct 675555 GATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTTTT 675496 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||||||| ||||| ||||||| |||||| Sbjct 675495 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 >seq1 Length=3544467 Score = 116 bits (128), Expect = 9e-21 Identities = 153/210 (73%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 151887 AGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTC 151946 ||||||||||| | ||||| ||||||||||| ||||| || ||||||| | || | Sbjct 2378097 AGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGAAAGGGTGCGA 2378156 Query 151947 CCATCTTCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTT 152004 |||||||| || ||||| |||||||| || | | ||| ||||| | | || |||| Sbjct 2378157 CCATCTTCCAGTTGCTTT--CCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATGCCTT 2378214 Query 152005 CCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAG 152064 |||| |||||||| || || || | || | | |||||||| || || ||||| | Sbjct 2378215 CCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGG 2378274 Query 152065 TAATAGTTTTGCCCGTGAGAGTCTTCACGA 152094 | || || || || || |||||||| |||| Sbjct 2378275 TGATGGTCTTTCCGGTAAGAGTCTTAACGA 2378304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815330168270