Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1 172 1e-37 seq15 163 6e-35 seq12 129 1e-24 seq7 107 4e-18 seq21 87.8 4e-12 >seq1 Length=3544467 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| |||| |||||| || ||| ||||| |||||||| || | Sbjct 2377859 ACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGA 2377918 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || || ||||| ||||| || || |||||||| | ||||||||| || || Sbjct 2377919 AAGTGTACGACCGTCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGGTGG 2377978 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||||| ||||||||||| | || || | ||||| || ||||| | ||| || Sbjct 2377979 GATACCCTCCTTATCTTGGATCTTCGACTTCACATTGTCGATGGTATCCGATGATTCAAC 2378038 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || || | ||||| ||||| |||||||| Sbjct 2378039 CTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAAATCTGCAT 2378086 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || || |||||||| ||||| || ||||| || | Sbjct 2377631 ACCACCACGAAGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGA 2377690 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || | ||| ||||| | || || || ||||||||||| |||||||| ||| || Sbjct 2377691 AAGGGTTCTGCCGTCCTCCAACTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGG 2377750 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| || ||||||| ||| || |||| || || || || | ||| || Sbjct 2377751 AATGCCCTCCTTGTCCTGAATCTTTGATTTAACATTATCAATGGTATCTGACGATTCCAC 2377810 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | || || ||||| || ||||| ||||| || || || ||||| Sbjct 2377811 TTCTAATGTAATTGTCTTGCCAGTCAAGGTCTTGACAAAGATTTGCAT 2377858 Score = 158 bits (174), Expect = 3e-33 Identities = 168/222 (76%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || | || |||| || | || ||||| ||||| || || || | Sbjct 2378087 ACCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCTTTCTGGATATTATAATCGGA 2378146 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || ||||| || ||||| || |||||||| |||||||| || Sbjct 2378147 AAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGG 2378206 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| | || ||| | ||||| ||||| |||| |||||| Sbjct 2378207 AATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGAC 2378266 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATAT 283093 || || ||||| ||||| || || | ||||||||||| ||| Sbjct 2378267 CTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAACGACTAT 2378308 Score = 145 bits (160), Expect = 2e-29 Identities = 158/207 (76%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCA-G 282930 ||||||||| || | || |||| || | ||| || || ||||||||||||||| Sbjct 2378369 ACCACCACGAAGTCTGAGGACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACT 2378428 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| ||||| ||||| || |||||||| ||||| ||||||||||| |||||||| | Sbjct 2378429 CAAG-GTGCGACCATCTTCAAGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAG 2378487 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 |||| ||||||||||| |||||||| | || ||| | ||||| ||||| | || | Sbjct 2378488 GAATTCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGCTGGACTCAA 2378547 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCA 283077 | ||||| || || |||||||| |||| Sbjct 2378548 CCTCGAGGGTAATGGTCTTACCGGTCA 2378574 >seq15 Length=1659866 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || | |||| || | || || |||||||||||||| || | Sbjct 675693 ACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGA 675634 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || ||||| || ||||| |||||||| || |||||||| || Sbjct 675633 AAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGG 675574 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| | || || | ||||| ||||| |||| || || Sbjct 675573 AATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAAC 675514 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||| || || ||||| | ||||| ||||| |||||||| Sbjct 675513 CTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 675466 >seq12 Length=1765576 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 |||||||||||||| || | || || || || || || | ||| || || || |||||| Sbjct 99194 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 99135 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 ||||||||||| || ||||| ||||||||||| |||||||| | || || | ||| Sbjct 99134 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 99075 Query 283032 ATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || ||||| || | ||||| || || ||||| ||||| ||||| | ||||| ||||| Sbjct 99074 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 99016 >seq7 Length=2023280 Score = 107 bits (118), Expect = 4e-18 Identities = 305/465 (66%), Gaps = 8/465 (2%) Strand=Plus/Plus Query 229950 TTTGCAGAGCGTCTCGTCGCGTGGGTGTGCGTTGAGGGTATTCTGTTCTCCGGGAGTTTC 230009 ||||| | ||||| ||||| | | |||||| ||||| | |||||||| ||| Sbjct 1768119 TTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGTATCTTTTTCTCCGGATCCTTC 1768178 Query 230010 TGCGCCATCTTTTGGCTACGCAACAAGGGCG---TCATGCCCGGGCTCGGTCTGTCGAAC 230066 | | ||||| ||||| ||| ||| | | ||||| |||| ||| | || ||| Sbjct 1768179 GCCTCTATCTTCTGGCT---CAAGAAGCGTGGTCTCATGGCCGGACTCACCTTTTCAAAC 1768235 Query 230067 GAATTCATCAGCAGGGACGAAGGTCTTCACCAGCAATTTGGCGAGG-TCTTGTATTCGAA 230125 ||| ||||| | | ||||||||||| ||| | | |||| || | || | | || | Sbjct 1768236 GAACTCATCTCCCGTGACGAAGGTCTCCAC-ACCGATTTCGCATGCCTCCTCTTCTCCCA 1768294 Query 230126 GCTAAATAACAAACTACCTTTCGAAACGGTGAAACAAATCGTCACAGAAGTAGTTGCAAA 230185 || || || | | | || | || || | || |||| || | || |||| Sbjct 1768295 TCTCAAGCACCGCCCATCCAAGCAAGCTGTCCAAGACGTCATCACCGAGGCCGTCGCAAT 1768354 Query 230186 TGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCT 230245 || | || ||| | ||| ||| ||||||| |||| | |||||||| | || Sbjct 1768355 CGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTCTAGGCATGAACTCCACCCT 1768414 Query 230246 CATGGGGCAATATATCGAATTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAA 230305 |||| ||| || ||||||||||| ||||||||| | || | || | || |||| || Sbjct 1768415 CATGAAGCAGTACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGCAACGACAA 1768474 Query 230306 AGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAAC 230365 ||| || || || || || || | || |||||| ||||| | || || || Sbjct 1768475 AGTCTACAAATCTGCCAATCCATTTGACTTCATGGAGAATATTTCCTTGGCCGGCAAGAC 1768534 Query 230366 TAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGGCCCGGTGT 230410 |||||| ||||||||| | || | ||||| |||| | ||||||| Sbjct 1768535 TAACTTTTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCCGGTGT 1768579 >seq21 Length=772658 Score = 87.8 bits (96), Expect = 4e-12 Identities = 132/188 (70%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 316983 GTCGAGGTCATGCTCAACATATGCAGTTTTCAGAATATCCTTCGTCGGGAACCCTTCCAA 317042 |||||| || |||||||| | |||| || | | |||| | ||||| || || | Sbjct 238188 GTCGAGATCGTGCTCAACGAACACAGTCTTAACCTCACTCTTCTTGGGGAAACCCTCGAC 238247 Query 317043 CTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCATTGGGGCCGCAAAG 317102 || |||| ||| || | ||| || || || || || | ||| || || ||||| || Sbjct 238248 TTGCTCGTTGTTAATAGCACGCATGAGAGTAGATTTTCCGGAACCGTTAGGACCGCAGAG 238307 Query 317103 ACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGAAGAATCTTACCACC 317162 |||||| || | || ||| ||| | | |||||||||| ||||||||||| |||| Sbjct 238308 ACCATATCGTTGACCACGCTTGAGACGGAGATGGGTGTTGTTAAGAAGAATCTTGGCACC 238367 Query 317163 ATATGCCA 317170 |||||||| Sbjct 238368 ATATGCCA 238375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046734237801980