Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq15 163 7e-35 seq1 156 1e-32 seq12 129 1e-24 >seq15 Length=1659866 Score = 163 bits (180), Expect = 7e-35 Identities = 160/205 (78%), Gaps = 1/205 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || ||||| |||||||||||||| || || ||| Sbjct 675469 CAGATCTTCGTCAAGACCCTCACGGGCAAAACCATCACCCTCGAGGTTGAGTCTTCCGAC 675528 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || ||||| || || ||||| || Sbjct 675529 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCACCCGACCAACAG 675588 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | |||||||||||||| || ||||||||||| | || ||| ||||||| ||| || Sbjct 675589 CGATTGATCTTCGCCGGAAAGCAACTCGAAGATGGTCGCACCCTTTCCGATTACAACATC 675648 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || || || |||| Sbjct 675649 CAAAAGGAGTCTACTCTTCA-CTTG 675672 >seq1 Length=3544467 Score = 156 bits (172), Expect = 1e-32 Identities = 154/198 (78%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990 |||| || ||||| || ||||| || |||||||| ||||| ||| ||||||||||||| Sbjct 2378304 TCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCG 2378245 Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050 | ||||| || |||||||| ||||| ||||| || ||||| ||||| || || | | Sbjct 2378244 ACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAGCGTTTGA 2378185 Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAG 178110 | ||||||||||| || || |||||||| | || ||| |||||||||| |||| |||| Sbjct 2378184 TTTTCGCCGGAAAGCAACTGGAAGATGGTCGCACCCTTTCCGATTATAATATCCAGAAAG 2378125 Query 178111 AATCAACACTGCATCTTG 178128 | || || || || |||| Sbjct 2378124 AGTCTACCCTTCA-CTTG 2378108 Score = 116 bits (128), Expect = 9e-21 Identities = 139/185 (75%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAA 178004 || || || || || ||||||||||| || | ||||||||||| |||||||| Sbjct 2378572 ACCGGTAAGACCATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAACGTCAAGTCC 2378513 Query 178005 AAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAA 178064 ||||| |||||||| || ||||| ||||| ||||| || || | ||||||||||||||| Sbjct 2378512 AAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATCTTCGCCGGAAAA 2378453 Query 178065 CAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCA 178123 || || |||||||| | || |||| || || ||| |||| || || || || || || Sbjct 2378452 CAACTTGAAGATGGTCGCAC-CTTGAGTGACTACAACATCCAGAAGGAGTCCACTCTCCA 2378394 Query 178124 TCTTG 178128 |||| Sbjct 2378393 -CTTG 2378390 Score = 102 bits (112), Expect = 2e-16 Identities = 136/189 (72%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || | || || || || || || | || |||||| ||||| Sbjct 2377855 CAAATCTTTGTCAAGACCTTGACTGGCAAGACAATTACATTAGAAGTGGAATCGTCAGAT 2377796 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || ||| ||||||||||||||| || || || || || || || ||| Sbjct 2377795 ACCATTGATAATGTTAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAACAA 2377736 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||| | ||||| || ||||| ||| | || || || || || ||| | ||||| || | Sbjct 2377735 CGATTGATCTTTGCAGGAAAGCAGTTGGAGGACGGCAGAACCCTTTCGGATTACAATATT 2377676 Query 178104 CAAAAAGAA 178112 ||||| ||| Sbjct 2377675 CAAAAGGAA 2377667 >seq12 Length=1765576 Score = 129 bits (142), Expect = 1e-24 Identities = 136/179 (76%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 ||||| || || || || || || || |||||||| ||||| || ||| ||||||||| Sbjct 99016 TTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGACACCATC 99075 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| |||||||| || ||||| ||||| || || ||||| | Sbjct 99076 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAACGTTTG 99135 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108 |||||||| ||||| || | ||||| ||| | ||||| | ||||| ||| ||||||| Sbjct 99136 ATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATCCAAAA 99194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203725493561780