Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20duriaeana_20[genbank_20GCA_5F002162615.1_202017- 05-31] 370 sequences; 44,096,448 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq15 147 2e-30 seq1 93.3 4e-14 >seq15 Length=1659866 Score = 147 bits (162), Expect = 2e-30 Identities = 174/234 (74%), Gaps = 4/234 (2%) Strand=Plus/Minus Query 41632 ACCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTC 41691 ||| || || || ||||||||||||| || || || |||||| || ||||| || || Sbjct 675696 ACCACCACCACGGAGACGTAACACCAAGTGAAGAGTAGACTCCTTTTGGATGTTGTAATC 675637 Query 41692 GGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGC 41751 ||| |||||||| | || ||||| ||||| |||||||| |||| ||||||||||| | Sbjct 675636 GGAAAGGGTGCGACCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGG 675577 Query 41752 GGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGAC 41809 |||| | |||||||||| ||| || ||| || | || | |||||| ||| Sbjct 675576 TGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG--ATGGTGTCGGAAGAC 675519 Query 41810 TCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || ||||| | || || ||||| ||||| || ||||| ||||| ||||||||| Sbjct 675518 TCAACCTCGAGGGTGATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 675465 >seq1 Length=3544467 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 |||| || || ||| ||||||||| ||||| ||||| | |||||| | || || Sbjct 2378388 ACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCA 2378447 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATG 41773 || || || |||||||| |||| ||||||||||| | |||| | |||||||||| | Sbjct 2378448 AGTTGTTTTCCGGCGAAGATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGG 2378507 Query 41774 ATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 || || ||| ||| | | | |||||||| ||||| ||||| | || || || || Sbjct 2378508 ATCTTGGACTT-GACGTTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATGGTCTT 2378566 Query 41833 ACCCGTCA 41840 ||| |||| Sbjct 2378567 ACCGGTCA 2378574 Score = 89.7 bits (98), Expect = 5e-13 Identities = 131/183 (72%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||| ||||| || ||||| ||||| |||||||| | || || || ||||| |||||||| Sbjct 2378123 CTCTTTCTGGATATTATAATCGGAAAGGGTGCGACCATCTTCCAGTTGCTTTCCGGCGAA 2378182 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| ||||||||||| | |||| || ||||||| | ||| | || | | |||| Sbjct 2378183 AATCAAACGCTGTTGGTCGGGAGGAATGCCTTCCTTGT-CTTGAATCTTAGACTTAACGT 2378241 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | ||||| || || ||||| | || || || || || || || ||||| | Sbjct 2378242 TGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAA 2378301 Query 41850 CGA 41852 ||| Sbjct 2378302 CGA 2378304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462301861844000