Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_001993.1
Length=236120
Score E
Sequences producing significant alignments: (Bits) Value
seq3 127 3e-24
seq6 105 1e-17
>seq3
Length=2676204
Score = 127 bits (140), Expect = 3e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598
|||||||| ||| | ||||| | || ||||| || || || ||||| | ||| |
Sbjct 1949777 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACCATTACATTAGAGGTGGAATCGTCA 1949718
Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658
||||| ||| |||| ||||| || ||||| || || || || || ||||||||||||
Sbjct 1949717 GATACCATTGATAATGTAAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 1949658
Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718
||| | | || ||||||||||| ||||| ||||| | |||| | ||||| |||
Sbjct 1949657 CAACGATTGATCTTTGCAGGAAAGCAATTGGAGGACGGCAGAACCCTTTCGGATTACAAT 1949598
Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT 124766
|||||||| ||| || ||||| ||||| | ||| | || ||||||
Sbjct 1949597 ATTCAAAAGGAAAGCACCTTGCACTTGGTGCTCCGTCTTCGTGGTGGT 1949550
>seq6
Length=2097206
Score = 105 bits (116), Expect = 1e-17
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 205560 TACATGAAATTGTACAAAACAATGACAAGGTGGTATAACCATATTTTCAACATCTATAGG 205619
||| | ||||||| |||| ||||||||||||| |||| | | |||| |
Sbjct 1476580 TACGTAAAATTGTGCAAACATGTGACAAGGTGGTAATGCCATTAACTTGATATCTGCAAC 1476639
Query 205620 ATTCCAGGCTGTTAATATTATATTTCTAGATTCAGGtttattttttattttatttatAAT 205679
|||||| || ||| || || | ||| || ||||| |||| ||| || |||
Sbjct 1476640 ATTCCATGCGCTTAGGATAATTCTCCTATCCCATGGGTTATTCTTTAATTTCCATACAAT 1476699
Query 205680 ATGTGTTAATTGATCAAATCCTTGATTTGTATAATTTGTATCCATATCAATATATTTAGC 205739
| | || |||||||| || || ||| |||| ||| || |||||| ||||| ||
Sbjct 1476700 TTCCGCTAGTTGATCAACACCCTGTCCTGTGTAATCTGTCTCGGCATCAATGTATTTGGC 1476759
Query 205740 ACCAAAATGACGCCATTGAAAACCATAAACTGGACCTAAATCACCTTC 205787
||| ||||| ||||||||||| ||||| || ||||||||||| |||||
Sbjct 1476760 ACCGAAATGTCGCCATTGAAACCCATACACAGGACCTAAATCTCCTTC 1476807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 755451977196800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |