Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_002686.2
Length=124784
Score E
Sequences producing significant alignments: (Bits) Value
seq6 104 2e-17
>seq6
Length=2097206
Score = 104 bits (114), Expect = 2e-17
Identities = 165/231 (71%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274
|| || ||||| |||||||||||||| ||||||||| ||||||| || || |||| ||
Sbjct 1476807 GAAGGAGATTTAGGTCCTGTGTATGGGTTTCAATGGCGACATTTCGGTGCCAAATACATT 1476748
Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTA--CAAAATGTTATTAATT 20332
|| | ||| |||| ||||| || || |||||| || |||| ||| |
Sbjct 1476747 GATGCCGAGACAGATTACACAGGACAGGGTGTTGATCAACTAGCGGAAATTGTATGGA-- 1476690
Query 20333 TAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391
||||||| | |||||| || || |||||||| || |||| ||||| | | ||||
Sbjct 1476689 -AATTAAAGAATAACCCATGGGATAGGAGAATTATCCTAAGCGCATGGAATGTTGCAGAT 1476631
Query 20392 GTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGT 20441
| |||||||| || || || ||||| ||| | ||| |||||||||||
Sbjct 1476630 ATCAAGTTAATGGCATTACCACCTTGTCACATG-TTTGCACAATTTTACGT 1476581
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 399181927486570
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |