Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 >seq6 Length=2097206 Score = 104 bits (114), Expect = 2e-17 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 20215 GAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTT 20274 || || ||||| |||||||||||||| ||||||||| ||||||| || || |||| || Sbjct 1476807 GAAGGAGATTTAGGTCCTGTGTATGGGTTTCAATGGCGACATTTCGGTGCCAAATACATT 1476748 Query 20275 GACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTA--CAAAATGTTATTAATT 20332 || | ||| |||| ||||| || || |||||| || |||| ||| | Sbjct 1476747 GATGCCGAGACAGATTACACAGGACAGGGTGTTGATCAACTAGCGGAAATTGTATGGA-- 1476690 Query 20333 TAATTAAA-ACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGAT 20391 ||||||| | |||||| || || |||||||| || |||| ||||| | | |||| Sbjct 1476689 -AATTAAAGAATAACCCATGGGATAGGAGAATTATCCTAAGCGCATGGAATGTTGCAGAT 1476631 Query 20392 GTGCCTTTAATGGCTTTGCCTCCATGTCATATGCTATGC-CAATTTTACGT 20441 | |||||||| || || || ||||| ||| | ||| ||||||||||| Sbjct 1476630 ATCAAGTTAATGGCATTACCACCTTGTCACATG-TTTGCACAATTTTACGT 1476581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399181927486570