Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq35 120 6e-22
>seq35
Length=307329
Score = 120 bits (132), Expect = 6e-22
Identities = 353/540 (65%), Gaps = 8/540 (1%)
Strand=Plus/Plus
Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907
|||||||||||||| | |||||| | || ||||| ||| || ||| || ||
Sbjct 74054 CATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTCCACCTTTGC 74113
Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967
||| |||| || || ||||| |||||||| |||||||| || | ||||| ||
Sbjct 74114 TCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGGATCCTTCGCCTC 74173
Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027
|| |||||| ||||||| | ||| || || | || ||||||| |||||| || ||||
Sbjct 74174 TATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTCCAACGAACTCAT 74233
Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087
|| | ||||||||||| || ||| || |||||| | || || | | |
Sbjct 74234 CTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTCCCA---TCTCAA 74290
Query 102088 TGATACCCCATCAAGAGAAAG-GATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAAC 102146
| |||||| | || ||| | | || || |||| || |||||| |||||| |
Sbjct 74291 GCACCGCCCATCCA-AGCAAGCCGTCCAAGACGTTATCACCGAGGCCGTCGCAATTGAGC 74349
Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206
||||||| | || | | || ||| | | |||| ||||||| || | ||||
Sbjct 74350 AAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCCACCCTCATGA 74409
Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266
|| ||||| ||||| || || ||| || | | | |||| || || ||
Sbjct 74410 AGCAATACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAGTCT 74469
Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326
| || | ||||||| || |||||||| || |||||| | | ||||| ||||
Sbjct 74470 ACAAGTCTGCCAACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTAACT 74529
Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386
| || ||||||||||| | || || ||| || ||||||||| || | | ||||
Sbjct 74530 TCTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCTGGTGTCATGGCTGGTACCCAAAAGA 74589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989578598726830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |