Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq35 120 6e-22 >seq35 Length=307329 Score = 120 bits (132), Expect = 6e-22 Identities = 353/540 (65%), Gaps = 8/540 (1%) Strand=Plus/Plus Query 101851 CATCAAGAAGAAGGAGCAGTGGGCTATTAATTGGATGCAAAGCAATAACGAT---TTGGC 101907 |||||||||||||| | |||||| | || ||||| ||| || ||| || || Sbjct 74054 CATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTCCACCTTTGC 74113 Query 101908 GGAACTAATTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATC 101967 ||| |||| || || ||||| |||||||| |||||||| || | ||||| || Sbjct 74114 TCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGGATCCTTCGCCTC 74173 Query 101968 CATTTTCTGGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCAT 102027 || |||||| ||||||| | ||| || || | || ||||||| |||||| || |||| Sbjct 74174 TATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTCCAACGAACTCAT 74233 Query 102028 TTCTAGGGACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGT 102087 || | ||||||||||| || ||| || |||||| | || || | | | Sbjct 74234 CTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTCCCA---TCTCAA 74290 Query 102088 TGATACCCCATCAAGAGAAAG-GATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAAC 102146 | |||||| | || ||| | | || || |||| || |||||| |||||| | Sbjct 74291 GCACCGCCCATCCA-AGCAAGCCGTCCAAGACGTTATCACCGAGGCCGTCGCAATTGAGC 74349 Query 102147 AAGAATTTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGA 102206 ||||||| | || | | || ||| | | |||| ||||||| || | |||| Sbjct 74350 AAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCCACCCTCATGA 74409 Query 102207 GCCAGTACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACT 102266 || ||||| ||||| || || ||| || | | | |||| || || || Sbjct 74410 AGCAATACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAGTCT 74469 Query 102267 ATAATGTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACT 102326 | || | ||||||| || |||||||| || |||||| | | ||||| |||| Sbjct 74470 ACAAGTCTGCCAACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTAACT 74529 Query 102327 TTTTTGAAAAGAGAGTCGCCGAGTATCAACGTGCCCAGGTCATGGCTTCTATCAATAAGA 102386 | || ||||||||||| | || || ||| || ||||||||| || | | |||| Sbjct 74530 TCTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCTGGTGTCATGGCTGGTACCCAAAAGA 74589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989578598726830