Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 6e-12 >seq3 Length=2676204 Score = 86.0 bits (94), Expect = 6e-12 Identities = 131/187 (70%), Gaps = 0/187 (0%) Strand=Plus/Plus Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615 || ||||| | ||||||||||| || ||||| || || |||| |||| ||||| Sbjct 1950308 ACCAAGTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCA 1950367 Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675 || ||||| || || | |||| ||| || || |||||||| || || || ||||| | Sbjct 1950368 AGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGG 1950427 Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735 || || || | | || | |||||| ||| ||| ||||| | ||| | ||||| Sbjct 1950428 ATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATAGTCTTA 1950487 Query 139736 CCGGTCA 139742 ||||||| Sbjct 1950488 CCGGTCA 1950494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496061358459200