Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq3 86.0 6e-12
>seq3
Length=2676204
Score = 86.0 bits (94), Expect = 6e-12
Identities = 131/187 (70%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 139556 ACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCG 139615
|| ||||| | ||||||||||| || ||||| || || |||| |||| |||||
Sbjct 1950308 ACCAAGTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCA 1950367
Query 139616 AGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTG 139675
|| ||||| || || | |||| ||| || || |||||||| || || || ||||| |
Sbjct 1950368 AGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGG 1950427
Query 139676 ATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTG 139735
|| || || | | || | |||||| ||| ||| ||||| | ||| | |||||
Sbjct 1950428 ATCTTGGACTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATAGTCTTA 1950487
Query 139736 CCGGTCA 139742
|||||||
Sbjct 1950488 CCGGTCA 1950494
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496061358459200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |