Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_004778.3
Length=129593
Score E
Sequences producing significant alignments: (Bits) Value
seq3 95.1 1e-14
>seq3
Length=2676204
Score = 95.1 bits (104), Expect = 1e-14
Identities = 147/210 (70%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891
||||| |||||| || |||||||||||||||||||||| | ||| || |||||||
Sbjct 1949568 CACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTC 1949627
Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951
|| || || || ||| | || | || || ||||| || | |||||| |||||
Sbjct 1949628 CAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTG 1949687
Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011
||| || |||||| | | | ||||| | ||| || | |||||||| ||
Sbjct 1949688 AATCTTTGATTTTACATTATCAATGGTATCTGACGATTCCACCTCTAATGTAATGGTCTT 1949747
Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041
|| || ||||| |||||||| ||||||||
Sbjct 1949748 GCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 414570647589844
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |