Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=2676204 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 18832 CACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTC 18891 ||||| |||||| || |||||||||||||||||||||| | ||| || ||||||| Sbjct 1949568 CACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTC 1949627 Query 18892 CAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGC 18951 || || || || ||| | || | || || ||||| || | |||||| ||||| Sbjct 1949628 CAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTG 1949687 Query 18952 AATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTT 19011 ||| || |||||| | | | ||||| | ||| || | |||||||| || Sbjct 1949688 AATCTTTGATTTTACATTATCAATGGTATCTGACGATTCCACCTCTAATGTAATGGTCTT 1949747 Query 19012 ACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || || ||||| |||||||| |||||||| Sbjct 1949748 GCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414570647589844