Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq3 143 6e-29
>seq3
Length=2676204
Score = 143 bits (158), Expect = 6e-29
Identities = 147/192 (77%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 104368 TTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAA 104427
||| || |||||||| || || || || ||||| ||||| || | ||| ||||| |||||
Sbjct 1949586 TTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAATTGCTTTCCTGCAAA 1949645
Query 104428 AATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATT 104487
|| | | ||||||||||| || || || || || ||||||||||||| |||||||||
Sbjct 1949646 GATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTTACATT 1949705
Query 104488 TTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTAC 104547
|| | |||||| | ||| ||||||| |||||| ||||| ||||| | || || ||
Sbjct 1949706 ATCAATGGTATCTGACGATTCCACCTCTAATGTAATGGTCTTGCCAGTCAAAGTCTTGAC 1949765
Query 104548 AAATATCTGCAT 104559
||| || |||||
Sbjct 1949766 AAAGATTTGCAT 1949777
Score = 127 bits (140), Expect = 5e-24
Identities = 132/173 (76%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
||||| |||||||| || || |||||| | || | ||| ||||| |||||||||||
Sbjct 1950320 GTAGACTCTTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCAAGTTGTTTTCCG 1950379
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| | | |||||| || ||||| ||||| || || ||||| ||||| | ||
Sbjct 1950380 GCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTG 1950439
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGT 104535
||||| || | ||| ||||| | || ||||| || |||||||||||||| ||
Sbjct 1950440 ACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATAGTCTTACCGGT 1950492
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151392115523608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |