Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_005839.2 Length=131680 Score E Sequences producing significant alignments: (Bits) Value seq18 95.1 1e-14 >seq18 Length=865119 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/214 (71%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 48514 TAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGT 48572 |||||| || ||||| ||| ||||||||| ||||||||||| | || || || | | Sbjct 543459 TAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATC-GGAAAGGGTGCGGCCAT 543401 Query 48573 CCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGT 48632 | || || ||||| ||| || | || || ||||| || || || | | ||||||| Sbjct 543400 CTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGT 543341 Query 48633 CCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGG 48692 || || || ||||| | | ||||| |||| |||||| ||||| || |||| Sbjct 543340 CCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGG 543281 Query 48693 TTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726 |||| || ||||| || || || || |||||||| Sbjct 543280 TTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 543247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421249012916426