Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq9 107 3e-19
seq4 104 4e-18
>seq9
Length=1656127
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|||||||||||||| |||| | | |||| ||||| ||||| |||||||||||||||||
Sbjct 1096996 GCTAAGCGTCATCGTAAGAT-TTTGAGAGACAACATTCAAGGTATCACCAAGCCAGCTAT 1097054
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
| | ||||| |||||||||||||| ||||||||| | ||||
Sbjct 1097055 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 1097095
>seq4
Length=2630524
Score = 104 bits (114), Expect = 4e-18
Identities = 84/99 (85%), Gaps = 2/99 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| ||||||||||||| ||| | | |||| ||||||||||| || || |||||||||||
Sbjct 2320885 GCCAAGCGTCATCGCAAGATTT-TGAGAGACAACATCCAAGGCATAACTAAGCCAGCTAT 2320827
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530
| | ||||| |||||||||||||| ||||||||| ||||
Sbjct 2320826 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 2320788
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074810505218
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |