Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 107 3e-19 seq4 104 4e-18 >seq9 Length=1656127 Score = 107 bits (118), Expect = 3e-19 Identities = 86/101 (85%), Gaps = 2/101 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCG-CAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||| |||| | | |||| ||||| ||||| ||||||||||||||||| Sbjct 1096996 GCTAAGCGTCATCGTAAGAT-TTTGAGAGACAACATTCAAGGTATCACCAAGCCAGCTAT 1097054 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 | | ||||| |||||||||||||| ||||||||| | |||| Sbjct 1097055 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATTTCTG 1097095 >seq4 Length=2630524 Score = 104 bits (114), Expect = 4e-18 Identities = 84/99 (85%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||||||||||| ||| | | |||| ||||||||||| || || ||||||||||| Sbjct 2320885 GCCAAGCGTCATCGCAAGATTT-TGAGAGACAACATCCAAGGCATAACTAAGCCAGCTAT 2320827 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 | | ||||| |||||||||||||| ||||||||| |||| Sbjct 2320826 CAGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 2320788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074810505218