Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq3 114 1e-20
>seq3
Length=2676204
Score = 114 bits (126), Expect = 1e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864
|| ||| |||| | || || | |||||||||||| | ||||| ||||| |||
Sbjct 1950480 ATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 1950421
Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924
|| || || || |||||||| ||||| | | |||| || ||| |||||||| ||||||
Sbjct 1950420 AAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATTTTCGCCGGAAAACAACTTGAAGAT 1950361
Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984
| | | | | | || ||||| ||||| || ||||| |||||| |||| ||||||| |||
Sbjct 1950360 GGTCGCACCTTGAGTGACTACAACATCCAGAAAGAGTCTACTCTCCACTTGGTCCTCAGA 1950301
Query 26985 CTTAGAGGAGG 26995
||| | || ||
Sbjct 1950300 CTTCGTGGTGG 1950290
Score = 87.8 bits (96), Expect = 2e-12
Identities = 141/203 (69%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852
|| ||||| | |||||| | || | ||||| ||||||||||| | || ||
Sbjct 1950209 ACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCGACAACGTTAAGTCT 1950150
Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912
|||||| ||||| ||||| || |||||||| |||||| | | |||| || || ||
Sbjct 1950149 AAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAACGTTTGATTTTCGCTGGAAAG 1950090
Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972
||||| ||||| | | | | | | ||| ||||| || || || || ||||| | ||
Sbjct 1950089 CAACTGGAAGACGGTCGCACCCTTTCCGATTATAATATCCAGAAGGAGTCTACCCTTCAC 1950030
Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995
||||||| |||||| | || ||
Sbjct 1950029 TTGGTCCTCAGACTTCGTGGTGG 1950007
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478659851122720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |