Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq3 114 1e-20 >seq3 Length=2676204 Score = 114 bits (126), Expect = 1e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 26805 ATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGAC 26864 || ||| |||| | || || | |||||||||||| | ||||| ||||| ||| Sbjct 1950480 ATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAATGTCAAGTCCAAGATCCAGGAC 1950421 Query 26865 AAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGAT 26924 || || || || |||||||| ||||| | | |||| || ||| |||||||| |||||| Sbjct 1950420 AAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATTTTCGCCGGAAAACAACTTGAAGAT 1950361 Query 26925 GATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGA 26984 | | | | | | || ||||| ||||| || ||||| |||||| |||| ||||||| ||| Sbjct 1950360 GGTCGCACCTTGAGTGACTACAACATCCAGAAAGAGTCTACTCTCCACTTGGTCCTCAGA 1950301 Query 26985 CTTAGAGGAGG 26995 ||| | || || Sbjct 1950300 CTTCGTGGTGG 1950290 Score = 87.8 bits (96), Expect = 2e-12 Identities = 141/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 26793 ACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAA 26852 || ||||| | |||||| | || | ||||| ||||||||||| | || || Sbjct 1950209 ACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCGACAACGTTAAGTCT 1950150 Query 26853 AAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAA 26912 |||||| ||||| ||||| || |||||||| |||||| | | |||| || || || Sbjct 1950149 AAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAACGTTTGATTTTCGCTGGAAAG 1950090 Query 26913 CAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCAT 26972 ||||| ||||| | | | | | | ||| ||||| || || || || ||||| | || Sbjct 1950089 CAACTGGAAGACGGTCGCACCCTTTCCGATTATAATATCCAGAAGGAGTCTACCCTTCAC 1950030 Query 26973 CTGGTCCTGAGACTTAGAGGAGG 26995 ||||||| |||||| | || || Sbjct 1950029 TTGGTCCTCAGACTTCGTGGTGG 1950007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478659851122720