Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq38 304 3e-77
seq35 95.1 3e-14
>seq38
Length=269250
Score = 304 bits (336), Expect = 3e-77
Identities = 1115/1725 (65%), Gaps = 26/1725 (2%)
Strand=Plus/Plus
Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507
||||| || || || ||| | ||||||||||| ||||||| || | ||| ||||
Sbjct 55365 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATTGAA 55424
Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAA 363565
|| || |||||||| || ||| | || | ||| ||||| || ||| ||||||
Sbjct 55425 AGTGCTATCGAAACATACAA-CTTG-ATGTCAAACAAGTACTTCACACATGCCTCGCCAA 55482
Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625
|| | | | ||| || |||| | |||| | || || ||||| ||| | | ||||
Sbjct 55483 CACTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGA 55542
Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685
|||| || || || ||||| | || || | |||| ||||||| | || || ||||
Sbjct 55543 AGGAGGACAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGA 55602
Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744
|||| || || |||||| | || ||| | ||||| || | | |||||| |
Sbjct 55603 ATGCCGGTGGTATTGGTCTCAACATTCACCGAATCCGTGCTACTGG-CGCATACATTGCC 55661
Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804
|| || ||| |||| || || | ||||| ||||| || || || |||| |||||
Sbjct 55662 GGTACCAACGGAAACTCTAACGGTATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCC 55721
Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864
|| || || || || ||||| ||||| || || |||||| | || || |||||
Sbjct 55722 AGATATGTTGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAGCCA 55781
Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924
||||| ||| |||||||||| ||||| || || ||||| || ||||| ||| |
Sbjct 55782 TGGCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAAGAAGAAGTT 55841
Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984
|||||||| ||||| ||||| || | ||| || |||| | || |||||||| || ||
Sbjct 55842 CGTGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAA 55901
Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044
| | ||||| | ||| | ||||| |||||||||||||| | | ||||| |
Sbjct 55902 AAGAATGGGGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTAT 55961
Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104
|| || || | | ||||| ||||| || ||| || || |||| ||| |||||
Sbjct 55962 GGCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAAGACT 56021
Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164
|| || || || || |||| |||| | || | || | ||||| |||| |||
Sbjct 56022 ATCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATCCC 56081
Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224
| ||| | ||||| ||| | |||||| ||| |||||| || |||| ||||| |||
Sbjct 56082 TTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGTACTATT 56141
Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283
| |||| ||| | || || || || |||| ||| | || || || ||| |||
Sbjct 56142 C-GCAGCTCCAATTTGTGCACAGAAATCGTTGAGTACTCTGCACCAGATGAGGTTGCTTG 56200
Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTTGA 364337
|||||| | || || ||||| | || | || | | || || || |||| |||
Sbjct 56201 CTGTAACTTGGCTTCCATCGCTTTACCAACTTTCGTCAACATGAATGAGGGAACTTATGA 56260
Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397
||| | ||| | || || | | || | | | || | | ||| |||| ||
Sbjct 56261 TTTCCAAAAGCTTCACGAGGTTGTCCAAGTTGTTGTTAGAAACTTGAATAAGATTATTGA 56320
Query 364398 CAAGAATTATTATCCAATTCCTGAAG-CCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456
|| || || |||||| | | || | |||| | ||| | |||||||| || || |
Sbjct 56321 CATCAACTACTATCCAGTCGCAGAGGCCCGAAAAAGC-AATTTCCGTCATCGACCTATCG 56379
Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516
| ||||||| || || || ||||| | ||| || || | ||||||| || |
Sbjct 56380 CTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTCCATTTGACTCTC 56439
Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576
| || || || || | | || || || || || || || || ||||
Sbjct 56440 CAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGCTGCCTTGACCT 56499
Query 364577 CTTCGTGTGATTTGGCAAA-AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTT 364635
|||| || | ||||| | | || | ||| || ||| | || ||||| |
Sbjct 56500 CTTCCGTCGAGATCGCAAAGGAACTTGGCCCA-TACGAAACCTATCAAGGCTCCCCAGTC 56558
Query 364636 TCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG 364695
|| |||| || | || | ||| | ||| || || || ||| ||| | |||
Sbjct 56559 TCTAAGGGTGAACTTCAATACGATATGTGGGGGGTTACACCTACTGATTTGTGGGATTGG 56618
Query 364696 GATACGCTACGTTCCAA--CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753
| || || | ||| | | ||| | || || | |||||||| ||| | || |
Sbjct 56619 G--ACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACTCTCTCCTAGTTGCAC 56676
Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813
| ||||| || ||| || | || || || || |||||| || |||||||| |||
Sbjct 56677 CTATGCCTACTGCTAGCACATCCCAAATTCTTGGCTTCAACGAATGTTTCGAACC--TTA 56734
Query 364814 CA-AGCAATC-TTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871
|| ||| | | || || || || |||||| |||||||||| | || |||||| |
Sbjct 56735 CACTTCAAACATCTACTCTCGTCGTGTTCTTGCCGGAGAATTCCAAGTCGTTAATCCATG 56794
Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931
|| ||||||| ||| ||| || || ||| ||||| ||||||||| ||||||
Sbjct 56795 GCTTCTCAAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATATGAAGAACCGTATCAT 56854
Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991
|| | | ||| || | || || || || |||||| || | ||| || ||||
Sbjct 56855 TGCTGATGGTGGATCCATTCAAAATATCCCCAATATTCCAGCTGACATCAAGGCTCTTTA 56914
Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051
||| || || |||||||| ||| ||||| | || | ||||| || ||||| |||||
Sbjct 56915 CAAGACTGTTTGGGAAATCTCCCAACGAACAATTGTTCAAATGGCTGCTGATCGTGGTGC 56974
Query 365052 TTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCT 365111
|| || ||| || || | ||| | ||||| | || || | |||| |
Sbjct 56975 ATTCATTGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCAAGAT 57034
Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156
||||||||||||||| || ||||||| ||| | ||||| ||
Sbjct 57035 TACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCGG 57079
>seq35
Length=307329
Score = 95.1 bits (104), Expect = 3e-14
Identities = 347/530 (65%), Gaps = 14/530 (3%)
Strand=Plus/Plus
Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAACGTTCA--TTCGC 22487
|| ||||| ||||| || ||||| | |||||||| | || |||| | || || ||
Sbjct 74055 ATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAAC-TCCACCTTTGC 74113
Query 22488 GGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGC 22547
|||||||| | ||||| |||| ||||||||||| ||||| || ||| | || |
Sbjct 74114 TCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGGATCCTTCGCCTC 74173
Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607
||||| ||||| || || |||| ||||| | || || || || || || || | ||
Sbjct 74174 TATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTCCAACGAACTCAT 74233
Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCAT 22667
||| || || ||||| || |||||||| || || | || | || ||| |||
Sbjct 74234 CTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCT-TC--TCCCATCTCAA 74290
Query 22668 TCA-TAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAAC 22726
|| | |||| | || | || | || |||| || | || || | | |||| |
Sbjct 74291 GCACCGCCCATCCA-AGCAAGCCGTCCAAGACGTTATCACCGAGGCCGTCGCAATTGAGC 74349
Query 22727 GTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGA 22786
||| | |||||| | || ||| | || || || || ||||
Sbjct 74350 AAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCCACCCTCATGA 74409
Query 22787 GTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATG-CAAAGCAT 22845
||| || |||| ||||| |||||||| | || | | ||| | | |||||
Sbjct 74410 AGCAATACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAG-TC 74468
Query 22846 TATAACGTC-GTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAA 22904
|| || ||| | || |||||||| | ||||| ||||| | | || ||||| ||
Sbjct 74469 TACAA-GTCTGCCAACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTAA 74527
Query 22905 TTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATG 22954
||||||||||| ||||||||||| |||||||| || ||||| |||| ||
Sbjct 74528 CTTCTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCTGGTGTCATGGCTG 74577
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303346486133132
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