Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq38 304 3e-77 seq35 95.1 3e-14 >seq38 Length=269250 Score = 304 bits (336), Expect = 3e-77 Identities = 1115/1725 (65%), Gaps = 26/1725 (2%) Strand=Plus/Plus Query 363448 GAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGAT 363507 ||||| || || || ||| | ||||||||||| ||||||| || | ||| |||| Sbjct 55365 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATTGAA 55424 Query 363508 GCCGCGATTGAAACATATAAGCTTCTAAGTGCT-CGTGTA-TTCACGCACGCCACGCCAA 363565 || || |||||||| || ||| | || | ||| ||||| || ||| |||||| Sbjct 55425 AGTGCTATCGAAACATACAA-CTTG-ATGTCAAACAAGTACTTCACACATGCCTCGCCAA 55482 Query 363566 CAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGA 363625 || | | | ||| || |||| | |||| | || || ||||| ||| | | |||| Sbjct 55483 CACTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGA 55542 Query 363626 AGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGA 363685 |||| || || || ||||| | || || | |||| ||||||| | || || |||| Sbjct 55543 AGGAGGACAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGA 55602 Query 363686 ATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGC 363744 |||| || || |||||| | || ||| | ||||| || | | |||||| | Sbjct 55603 ATGCCGGTGGTATTGGTCTCAACATTCACCGAATCCGTGCTACTGG-CGCATACATTGCC 55661 Query 363745 GGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCG 363804 || || ||| |||| || || | ||||| ||||| || || || |||| ||||| Sbjct 55662 GGTACCAACGGAAACTCTAACGGTATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCC 55721 Query 363805 AGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCT 363864 || || || || || ||||| ||||| || || |||||| | || || ||||| Sbjct 55722 AGATATGTTGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTTGCTGTTTACCTTGAGCCA 55781 Query 363865 CATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTG 363924 ||||| ||| |||||||||| ||||| || || ||||| || ||||| ||| | Sbjct 55782 TGGCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAAGAAGAAGTT 55841 Query 363925 CGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG 363984 |||||||| ||||| ||||| || | ||| || |||| | || |||||||| || || Sbjct 55842 CGTGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAA 55901 Query 363985 GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGG 364044 | | ||||| | ||| | ||||| |||||||||||||| | | ||||| | Sbjct 55902 AAGAATGGGGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTAT 55961 Query 364045 GGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || || | | ||||| ||||| || ||| || || |||| ||| ||||| Sbjct 55962 GGCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAAGACT 56021 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 || || || || || |||| |||| | || | || | ||||| |||| ||| Sbjct 56022 ATCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATCCC 56081 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 | ||| | ||||| ||| | |||||| ||| |||||| || |||| ||||| ||| Sbjct 56082 TTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGTACTATT 56141 Query 364225 CAGCAG-AGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGT 364283 | |||| ||| | || || || || |||| ||| | || || || ||| ||| Sbjct 56142 C-GCAGCTCCAATTTGTGCACAGAAATCGTTGAGTACTCTGCACCAGATGAGGTTGCTTG 56200 Query 364284 ATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTG------TAAAAGATGGTACTTTTGA 364337 |||||| | || || ||||| | || | || | | || || || |||| ||| Sbjct 56201 CTGTAACTTGGCTTCCATCGCTTTACCAACTTTCGTCAACATGAATGAGGGAACTTATGA 56260 Query 364338 CCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGA 364397 ||| | ||| | || || | | || | | | || | | ||| |||| || Sbjct 56261 TTTCCAAAAGCTTCACGAGGTTGTCCAAGTTGTTGTTAGAAACTTGAATAAGATTATTGA 56320 Query 364398 CAAGAATTATTATCCAATTCCTGAAG-CCGAGCGTTCTAATATGCGTCATCGCCCGATTG 364456 || || || |||||| | | || | |||| | ||| | |||||||| || || | Sbjct 56321 CATCAACTACTATCCAGTCGCAGAGGCCCGAAAAAGC-AATTTCCGTCATCGACCTATCG 56379 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGATGGCATTTGATTCGC 364516 | ||||||| || || || ||||| | ||| || || | ||||||| || | Sbjct 56380 CTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTCCATTTGACTCTC 56439 Query 364517 CTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACTG 364576 | || || || || | | || || || || || || || || |||| Sbjct 56440 CAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGCTGCCTTGACCT 56499 Query 364577 CTTCGTGTGATTTGGCAAA-AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTCTT 364635 |||| || | ||||| | | || | ||| || ||| | || ||||| | Sbjct 56500 CTTCCGTCGAGATCGCAAAGGAACTTGGCCCA-TACGAAACCTATCAAGGCTCCCCAGTC 56558 Query 364636 TCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACTGG 364695 || |||| || | || | ||| | ||| || || || ||| ||| | ||| Sbjct 56559 TCTAAGGGTGAACTTCAATACGATATGTGGGGGGTTACACCTACTGATTTGTGGGATTGG 56618 Query 364696 GATACGCTACGTTCCAA--CGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753 | || || | ||| | | ||| | || || | |||||||| ||| | || | Sbjct 56619 G--ACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACTCTCTCCTAGTTGCAC 56676 Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813 | ||||| || ||| || | || || || || |||||| || |||||||| ||| Sbjct 56677 CTATGCCTACTGCTAGCACATCCCAAATTCTTGGCTTCAACGAATGTTTCGAACC--TTA 56734 Query 364814 CA-AGCAATC-TTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTA 364871 || ||| | | || || || || |||||| |||||||||| | || |||||| | Sbjct 56735 CACTTCAAACATCTACTCTCGTCGTGTTCTTGCCGGAGAATTCCAAGTCGTTAATCCATG 56794 Query 364872 CCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCAT 364931 || ||||||| ||| ||| || || ||| ||||| ||||||||| |||||| Sbjct 56795 GCTTCTCAAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATATGAAGAACCGTATCAT 56854 Query 364932 CGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTA 364991 || | | ||| || | || || || || |||||| || | ||| || |||| Sbjct 56855 TGCTGATGGTGGATCCATTCAAAATATCCCCAATATTCCAGCTGACATCAAGGCTCTTTA 56914 Query 364992 CAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGC 365051 ||| || || |||||||| ||| ||||| | || | ||||| || ||||| ||||| Sbjct 56915 CAAGACTGTTTGGGAAATCTCCCAACGAACAATTGTTCAAATGGCTGCTGATCGTGGTGC 56974 Query 365052 TTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCT 365111 || || ||| || || | ||| | ||||| | || || | |||| | Sbjct 56975 ATTCATTGATCAATCTCAATCAATGAACATTCACATGAAGGATCCTACAATGGGCAAGAT 57034 Query 365112 TACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGG 365156 ||||||||||||||| || ||||||| ||| | ||||| || Sbjct 57035 TACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCGG 57079 >seq35 Length=307329 Score = 95.1 bits (104), Expect = 3e-14 Identities = 347/530 (65%), Gaps = 14/530 (3%) Strand=Plus/Plus Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAACGTTCA--TTCGC 22487 || ||||| ||||| || ||||| | |||||||| | || |||| | || || || Sbjct 74055 ATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAAC-TCCACCTTTGC 74113 Query 22488 GGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGC 22547 |||||||| | ||||| |||| ||||||||||| ||||| || ||| | || | Sbjct 74114 TCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGGATCCTTCGCCTC 74173 Query 22548 AATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAAT 22607 ||||| ||||| || || |||| ||||| | || || || || || || || | || Sbjct 74174 TATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTCCAACGAACTCAT 74233 Query 22608 TAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCAT 22667 ||| || || ||||| || |||||||| || || | || | || ||| ||| Sbjct 74234 CTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCT-TC--TCCCATCTCAA 74290 Query 22668 TCA-TAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAAC 22726 || | |||| | || | || | || |||| || | || || | | |||| | Sbjct 74291 GCACCGCCCATCCA-AGCAAGCCGTCCAAGACGTTATCACCGAGGCCGTCGCAATTGAGC 74349 Query 22727 GTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGA 22786 ||| | |||||| | || ||| | || || || || |||| Sbjct 74350 AAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCCACCCTCATGA 74409 Query 22787 GTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATG-CAAAGCAT 22845 ||| || |||| ||||| |||||||| | || | | ||| | | ||||| Sbjct 74410 AGCAATACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAG-TC 74468 Query 22846 TATAACGTC-GTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAA 22904 || || ||| | || |||||||| | ||||| ||||| | | || ||||| || Sbjct 74469 TACAA-GTCTGCCAACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTAA 74527 Query 22905 TTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATGGATG 22954 ||||||||||| ||||||||||| |||||||| || ||||| |||| || Sbjct 74528 CTTCTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCTGGTGTCATGGCTG 74577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303346486133132