Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq35 114 1e-20
>seq35
Length=307329
Score = 114 bits (126), Expect = 1e-20
Identities = 198/287 (69%), Gaps = 3/287 (1%)
Strand=Plus/Minus
Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421
|| ||||| ||||| | ||||| || |||| || || | |||||||| ||||||
Sbjct 73948 ATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGG 73889
Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481
|| |||||||| |||| || || | |||||| ||||| | |||| ||| || |
Sbjct 73888 AAACCGTAGAAGCATCGTGCCTCTGGGATCTGAACTTCACCACTGAATCGCTCAACCAAG 73829
Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541
|| || ||||| || || || ||||| || || || || | | || || || |
Sbjct 73828 TTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAA 73769
Query 93542 TTCTCATCATCTTTAAGC---TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCT 93598
||| ||||| || || || | ||| ||| ||||| ||||| | ||| | |||
Sbjct 73768 CGCTCGTCATCATTGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCT 73709
Query 93599 TCGACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATAT 93645
|| | ||||| || ||||| ||||||||||||||||| | ||| ||
Sbjct 73708 TCTGCGGTCCAGAAAGATGCCTCTGCTTTTTTGTACATCTGCCAGAT 73662
Score = 100 bits (110), Expect = 3e-16
Identities = 262/391 (67%), Gaps = 8/391 (2%)
Strand=Plus/Minus
Query 92926 ATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGAAGACGTAC 92985
|||||| || ||||| ||||| || ||| | | ||||| || | |||| | ||
Sbjct 74435 ATCAGCAACGAATTCGATGTATTGCTTCATGAGGGTGGAGTTCATGCCCAAAAGA-GCAC 74377
Query 92986 A-GGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAGATTTCTA 93044
| || ||||| ||||||||||| |||| ||| ||| | ||||| || | | | |||
Sbjct 74376 AAGGAAGAGCCTCGGTCAAGAATTCTTGCTCAATTGCGACGGCCTCGGTGATAACGTCTT 74317
Query 93045 TTACT-CTACTATTTGG-TGGTTTTTGTACGACATAATTGTACATTAAGCACGCAAAGTC 93102
|| || | |||| ||| || || || | | | | ||| || || ||
Sbjct 74316 GGACGGCT--TGCTTGGATGGGCGGTGCTTGAGATGGGAGAAGAGGAGGCATGCGAAATC 74259
Query 93103 GGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAACCTGGTAACAG 93162
||| || | ||||||||| || || || | || ||| ||| || | || | | ||
Sbjct 74258 GGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAG 74199
Query 93163 TCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaTATACCTTCCAC 93222
|| || ||||||||||| || || || || || || || || || || ||||| ||
Sbjct 74198 ACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAAC 74139
Query 93223 GGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCTG-ATCCATTTTA 93281
||| || ||||| |||| ||||| ||||| | | | ||| | || |||||||| |
Sbjct 74138 GGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTA-TCTTGAATCCATTTGA 74080
Query 93282 AAGCCCAATCGGCTTTTTTCTTAATACAAGG 93312
|||||| ||||| || ||||| || |||||
Sbjct 74079 CAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 74049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556857834716240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |