Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq6 89.7 1e-12 >seq6 Length=2097206 Score = 89.7 bits (98), Expect = 1e-12 Identities = 153/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 ||||||||||| || ||||| || | |||||||||| |||||||| || ||| Sbjct 1555908 GGTGAGGATCTTTGCAACTGTACCTTTAACTTGGCATATGGTGCCAAGATTCTTCTTAAC 1555849 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| ||| |||||||||| | || ||||||||| |||||| || || | Sbjct 1555848 AACACCCATCTCCGTCTCAAGCGTGGTCAACGATATGGTCTCTGCGGTCCTAACGGTTCC 1555789 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| ||||| ||||| || ||| |||| || | || || || || || Sbjct 1555788 GGAAAGTCTACTCTCATGCGTGCTATTAACAACGAGCAAGTCGAGGGTTTCCCCAAGAAG 1555729 Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566 |||||| | ||| |||| || |||||||| |||||||| Sbjct 1555728 AGTGAGGTCAAGACTGTGTTCGTTGAGCACGATCTCGACTCC 1555687 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027831189938266