Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq6 89.7 1e-12
>seq6
Length=2097206
Score = 89.7 bits (98), Expect = 1e-12
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || ||||| || | |||||||||| |||||||| || |||
Sbjct 1555908 GGTGAGGATCTTTGCAACTGTACCTTTAACTTGGCATATGGTGCCAAGATTCTTCTTAAC 1555849
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| |||||||||| | || ||||||||| |||||| || || |
Sbjct 1555848 AACACCCATCTCCGTCTCAAGCGTGGTCAACGATATGGTCTCTGCGGTCCTAACGGTTCC 1555789
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||||| ||||| || ||| |||| || | || || || || ||
Sbjct 1555788 GGAAAGTCTACTCTCATGCGTGCTATTAACAACGAGCAAGTCGAGGGTTTCCCCAAGAAG 1555729
Query 279525 TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCC 279566
|||||| | ||| |||| || |||||||| ||||||||
Sbjct 1555728 AGTGAGGTCAAGACTGTGTTCGTTGAGCACGATCTCGACTCC 1555687
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027831189938266
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |