Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq35 120 7e-22 seq6 93.3 9e-14 >seq35 Length=307329 Score = 120 bits (132), Expect = 7e-22 Identities = 176/249 (71%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 243505 ATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTT 243564 ||||| || || || | || || | |||||| | ||| ||| |||| || ||| Sbjct 74325 ATCACCGAGGCCGTCGCAATTGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTT 74384 Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 | ||||||||||| |||||| || |||||||||||||| || || || | || Sbjct 74385 TTGGGCATGAACTCCACCCTCATGAAGCAATACATCGAATTCGTTGCTGATCGTCTCCTC 74444 Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684 ||||| | ||| | || ||||| ||||| || ||||| |||| ||| |||||| | Sbjct 74445 ATCGCTTTGGGTAACGACAAAGTCTACAAGTCTGCCAACCCATTTGACTTCATGGAGAAC 74504 Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCT 243744 ||||| | || || |||||||||||||||||| | || ||||||| ||| || Sbjct 74505 ATTTCCTTGGCCGGCAAGACTAACTTCTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCT 74564 Query 243745 GGTGTGATG 243753 ||||| ||| Sbjct 74565 GGTGTCATG 74573 >seq6 Length=2097206 Score = 93.3 bits (102), Expect = 9e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 334136 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 334195 |||||||||||| || ||| | |||| || | || | |||||| || || | Sbjct 1555690 GTCGAGATCGTGCTCAACGAACACAGTCTTGACCTCACTCTTCTTGGGGAAACCCTCGAC 1555749 Query 334196 CTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAG 334255 || |||| |||||| ||||| ||||| || || || | ||||| || || || || Sbjct 1555750 TTGCTCGTTGTTAATAGCACGCATGAGAGTAGACTTTCCGGAACCGTTAGGACCGCAGAG 1555809 Query 334256 ACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACC 334315 ||| || || | |||||||| ||| || | || ||||| |||||||| || |||| Sbjct 1555810 ACCATATCGTTGACCACGCTTGAGACGGAGATGGGTGTTGTTAAGAAGAATCTTGGCACC 1555869 Query 334316 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354 |||||||| ||| ||| | || ||||||||||| Sbjct 1555870 ATATGCCAAGTTAAAGGTACAGTTGCAAAGATCCTCACC 1555908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102873980343100