Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq35 120 7e-22
seq6 93.3 9e-14
>seq35
Length=307329
Score = 120 bits (132), Expect = 7e-22
Identities = 176/249 (71%), Gaps = 0/249 (0%)
Strand=Plus/Plus
Query 243505 ATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGGCTT 243564
||||| || || || | || || | |||||| | ||| ||| |||| || |||
Sbjct 74325 ATCACCGAGGCCGTCGCAATTGAGCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTT 74384
Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624
| ||||||||||| |||||| || |||||||||||||| || || || | ||
Sbjct 74385 TTGGGCATGAACTCCACCCTCATGAAGCAATACATCGAATTCGTTGCTGATCGTCTCCTC 74444
Query 243625 ATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCTC 243684
||||| | ||| | || ||||| ||||| || ||||| |||| ||| |||||| |
Sbjct 74445 ATCGCTTTGGGTAACGACAAAGTCTACAAGTCTGCCAACCCATTTGACTTCATGGAGAAC 74504
Query 243685 ATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCAACGCCCT 243744
||||| | || || |||||||||||||||||| | || ||||||| ||| ||
Sbjct 74505 ATTTCCTTGGCCGGCAAGACTAACTTCTTCGAAAAGAGAGTTGGTGATTACCAAAAGGCT 74564
Query 243745 GGTGTGATG 243753
||||| |||
Sbjct 74565 GGTGTCATG 74573
>seq6
Length=2097206
Score = 93.3 bits (102), Expect = 9e-14
Identities = 152/219 (69%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 334136 GTCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAG 334195
|||||||||||| || ||| | |||| || | || | |||||| || || |
Sbjct 1555690 GTCGAGATCGTGCTCAACGAACACAGTCTTGACCTCACTCTTCTTGGGGAAACCCTCGAC 1555749
Query 334196 CTGACCGTTCACAATAGCGCGCATCAGAGTTGATTTACCCGCCCCGTTTGGCCCACACAG 334255
|| |||| |||||| ||||| ||||| || || || | ||||| || || || ||
Sbjct 1555750 TTGCTCGTTGTTAATAGCACGCATGAGAGTAGACTTTCCGGAACCGTTAGGACCGCAGAG 1555809
Query 334256 ACCGTAGCGGTTTCCACGCTTCAGATTGAACCGCGTATTGTTCAGAAGAATTTTTCCACC 334315
||| || || | |||||||| ||| || | || ||||| |||||||| || ||||
Sbjct 1555810 ACCATATCGTTGACCACGCTTGAGACGGAGATGGGTGTTGTTAAGAAGAATCTTGGCACC 1555869
Query 334316 ATATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 334354
|||||||| ||| ||| | || |||||||||||
Sbjct 1555870 ATATGCCAAGTTAAAGGTACAGTTGCAAAGATCCTCACC 1555908
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102873980343100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |