Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq38 178 2e-39 seq35 114 2e-20 >seq38 Length=269250 Score = 178 bits (196), Expect = 2e-39 Identities = 1036/1632 (63%), Gaps = 47/1632 (3%) Strand=Plus/Minus Query 113603 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGACAACTTG 113662 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 57088 TAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTG 57029 Query 113663 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCA 113722 | ||| ||| | |||| | |||||| ||| |||||||| ||||| ||| Sbjct 57028 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCAATGAATGCACCA 56969 Query 113723 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 113780 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 56968 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGGGAGATTTCCCAAACAGTCTTGTAAA 56911 Query 113781 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGAGCCACCCGCCTTGACCA 113840 | ||| || ||| |||| |||| ||||||||| ||||| ||||| | | | Sbjct 56910 GAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCAGCAATGA 56851 Query 113841 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 113898 | | | |||||||| | ||||||||||| || | || |||| | || ||| Sbjct 56850 TACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATG 56791 Query 113899 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGT 113957 ||| || || || || || || || || | ||| ||||| || | |||| Sbjct 56790 G--ATTAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGTAGATGTTTGAAGTGT 56734 Query 113958 ATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCGGTGGAGGCTGTGGGCATGGGT 114016 | || || || || || ||| | |||||| |||||| ||| || || ||||| ||| Sbjct 56733 AAGGTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGT 56675 Query 114017 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCCCAG 114076 || | || || ||| |||| || | || | | ||| || ||| | | |||||| Sbjct 56674 GCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAA 56615 Query 114077 TCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGG 114134 || | | || | || | ||| ||||||||| | || || ||| | ||| Sbjct 56614 TCCCACAAATCAG-TAGGTGTAACCCC-CCACATATCGTATTGAAGTTCACCCTTAGAGA 56557 Query 114135 CTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 114194 |||| || || | | | || ||||||||||| ||| || | ||| | | Sbjct 56556 CTGGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGG 56497 Query 114195 CGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 114254 | ||| ||||| || || ||||| ||||| | || | ||||| || | Sbjct 56496 TCAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGAG 56437 Query 114255 AATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 114313 | ||||| | || || | || ||| |||| || |||||||| ||||| | | Sbjct 56436 AGTCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCG 56378 Query 114314 ATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATC 114372 || || ||||| | | ||| ||||| || ||| | || ||||| | || | || Sbjct 56377 ATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGTTGATGTC 56319 Query 114373 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 114432 |||| | |||| | ||| | ||||| | | || |||||||||| | |||| Sbjct 56318 AATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATC 56259 Query 114433 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 114489 | || | | ||| ||||| |||| | | || | ||||| || |||| ||||| Sbjct 56258 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACA 56202 Query 114490 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTT 114549 || |||||| ||| |||||| | ||||| || |||||||| || || Sbjct 56201 GCAAGCAACCTCATCTGGTGCAGAGTACTCAACGATTTCTGTGCACAAATTGGAGCTGCG 56142 Query 114550 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 114609 ||| || |||| ||||||||| || ||| |||| || |||||||||||||||||| | Sbjct 56141 AATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAA 56082 Query 114610 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCA 114668 || | || ||||| ||||| | || ||||| | | ||| | | | | || | | Sbjct 56081 GGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTG-A 56023 Query 114669 CAGTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCTTCAAACT 114722 ||| ||| || |||| ||| ||||| |||||| || || |||| Sbjct 56022 TAGT---CTTG---CGACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACT 55969 Query 114723 CTTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGAC 114782 | || || | |||| | ||||| | | ||||| | ||||| ||| | | Sbjct 55968 CCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCC 55909 Query 114783 CACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCC 114842 || || ||||||||||||||||| || || || ||||| | || |||||||||| | Sbjct 55908 CATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGC 55849 Query 114843 GACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCG 114902 | ||| ||||||| | || ||||| || | || | || || | | ||||| Sbjct 55848 GTGCACGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCG 55789 Query 114903 CGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTA 114959 | ||||| || || ||||| || || | | || ||| | |||| | || | | Sbjct 55788 CATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAA 55729 Query 114960 CATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCAT 115019 |||| || || ||| || || || || ||||| |||| |||||| | ||| | || | Sbjct 55728 CATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATACCGTTAGAGTTTCCGT 55669 Query 115020 TTGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACC 115077 | || || || || | | | | | || | || || |||| | ||||||||| Sbjct 55668 TGGTACCGGCAATGTATGCGCC--AGTAGCACGGATTCGGTGAATGTTGAGACCAATACC 55611 Query 115078 CCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGA 115137 || || ||||||||| || || | | | | | |||| || || || || Sbjct 55610 ACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACT 55551 Query 115138 GTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTT 115197 ||| |||| | ||||||||||||| || | ||||| ||| ||||| || Sbjct 55550 GTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGA 55491 Query 115198 GAAGAGGGTTGG 115209 |||||| ||||| Sbjct 55490 GAAGAGTGTTGG 55479 >seq35 Length=307329 Score = 114 bits (126), Expect = 2e-20 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 126058 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACC 126117 ||||||||| |||||||||||||||||||| || |||||| ||||| | ||| ||||| Sbjct 74255 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACC 74196 Query 126118 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACA 126177 |||||||| | |||||| || | || || || ||||||||||| || || || Sbjct 74195 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGC 74136 Query 126178 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC---AAACCACTTCAT 126234 ||||| || | ||||| | |||||||| | || || | || || ||| || | Sbjct 74135 AGCGAATGCGACAAGACGTTGAGCAAAGGTG---GAGTTCTTATCTTGAATCCATTTGAC 74079 Query 126235 CGCCCACTGCGCCTTTTTCTCGATACACGGGAC 126267 ||||| | ||||| |||| ||| || || || Sbjct 74078 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350419092080