Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq38 120 3e-22 >seq38 Length=269250 Score = 120 bits (132), Expect = 3e-22 Identities = 408/636 (64%), Gaps = 0/636 (0%) Strand=Plus/Plus Query 94003 TGTGCGACCATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCC 94062 ||||| | |||||||| | || || || || || ||| | ||| | ||||| Sbjct 55584 TGTGCTATGATCTCAAAGAATGCCGGTGGTATTGGTCTCAACATTCACCGAATCCGTGCT 55643 Query 94063 AGGGGTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGG 94122 | || | ||||| ||||||||| || | ||| ||||| |||| ||||||||||| Sbjct 55644 ACTGGCGCATACATTGCCGGTACCAACGGAAACTCTAACGGTATCGTTCCTATGCTCCGA 55703 Query 94123 GTCTTCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTC 94182 || ||||||||| | || | || || || || |||||| | | | ||| | || Sbjct 55704 GTTTTCAACAACACTGCCAGATATGTTGATCAAGGTGGTAATAAGCGTCCTGGTGCCTTT 55763 Query 94183 GCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAAC 94242 || || || || ||||| ||||| ||||| || | ||| | || || || || || Sbjct 55764 GCTGTTTACCTTGAGCCATGGCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAAT 55823 Query 94243 CACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTT 94302 || ||||| || | | || | || ||||||||||| | ||| | || || || Sbjct 55824 CATGGCAAAGAAGAAGTTCGTGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTA 55883 Query 94303 TTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCC 94362 || ||||| || || || || || | |||| ||| | || ||||| |||||||| Sbjct 55884 TTCATGAAGCGTGTTGAAAAGAATGGGGATTGGACTCTCATGTGCCCCAACGAATGTCCA 55943 Query 94363 GGACTGTCCGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAG 94422 || | | || |||| ||| | || || | | || | |||||||| | Sbjct 55944 GGTTTAGCAGATGTTTATGGCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCA 56003 Query 94423 GGCAAGGCCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAG 94482 ||||||| | ||| ||| | ||| || || ||| | || | || | || Sbjct 56004 GGCAAGGGTCGCAAGACTATCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAA 56063 Query 94483 GTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAG 94542 ||||| || | |||| ||| | | |||||| | |||| ||| |||||| Sbjct 56064 ACCGAGACCGGAAATCCCTTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAA 56123 Query 94543 CAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCT 94602 || |||| || || ||||| ||| ||||||| || || || ||||| || | Sbjct 56124 AAGAACCTGGGTACTATTCGCAGCTCCAATTTGTGCACAGAAATCGTTGAGTACTCTGCA 56183 Query 94603 CCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 || || ||| ||||| |||||| ||| |||||| Sbjct 56184 CCAGATGAGGTTGCTTGCTGTAACTTGGCTTCCATC 56219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494720565598960