Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq38 156 5e-33 seq35 111 2e-19 >seq38 Length=269250 Score = 156 bits (172), Expect = 5e-33 Identities = 1096/1739 (63%), Gaps = 45/1739 (3%) Strand=Plus/Minus Query 115564 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 115623 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 57088 TAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTG 57029 Query 115624 GAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 115683 | ||| ||| | |||| | |||||| ||| |||||||| ||||| || Sbjct 57028 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCAATGAATGCACCA 56969 Query 115684 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTTCTGTAGA 115741 ||||| || ||||| | || || || ||| | || ||||||| ||||| |||| | Sbjct 56968 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGGGAGATTTCCCAAACAGTCTTGTAAA 56911 Query 115742 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATAGAGCCACCTGCCTTGACCA 115801 | ||| || ||| |||| |||| ||||||||| || || ||||| | | | Sbjct 56910 GAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCAGCAATGA 56851 Query 115802 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCACGAGGTGCT 115861 | | | |||||||| | ||||||||||| || | || |||| | || Sbjct 56850 TACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATG 56791 Query 115862 TATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATGTTGGTCGTGTAT 115920 ||| || || || || || || || || | ||| |||||||| | ||||| Sbjct 56790 GATTAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGTAGATGTTTGAAGTGTAA 56732 Query 115921 GGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATGGGTGC 115979 || || || || || ||| | |||||| |||||| |||| || || ||||| ||||| Sbjct 56731 GGTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGC 56673 Query 115980 CATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTC 116039 | || || |||||||| || | | ||| || ||| | | |||||| || Sbjct 56672 AACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATC 56613 Query 116040 GTAGT--TGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCT 116097 | | || | || | ||| |||||||||| | || || ||| | || || Sbjct 56612 CCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAGAGACT 56555 Query 116098 GGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCG 116157 || || || | | | || || |||||||| ||| || | ||| | | Sbjct 56554 GGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGGTC 56495 Query 116158 AGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAA 116217 | ||| ||||| || || ||||| ||||| | || | ||||| || || Sbjct 56494 AAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGAGAG 56435 Query 116218 TCAAACGCGAGACGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAAT 116276 ||||| | ||||| | || ||| |||| || |||||||| ||||| | | || Sbjct 56434 TCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGAT 56376 Query 116277 TGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCC-ACGGGATAAAAATTCCTATCGA 116335 || ||||| | | ||| ||||| || ||| | || ||||| | || | || | Sbjct 56375 AGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGTTGATGTCAA 56317 Query 116336 TAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAA 116395 ||| | |||| | ||| | ||||| | | || |||||||||| | ||||| Sbjct 56316 TAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCAT 56257 Query 116396 AACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACACA 116452 || | | ||| ||||| |||| | | || | ||||| || |||| ||||| Sbjct 56256 AAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACAGC 56200 Query 116453 CAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAA 116512 || |||||| ||| |||||| | ||||| || |||||||| || || || Sbjct 56199 AAGCAACCTCATCTGGTGCAGAGTACTCAACGATTTCTGTGCACAAATTGGAGCTGCGAA 56140 Query 116513 TGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATG 116572 | || |||| ||||||||| || ||| |||| || ||||||||||| ||||| | | Sbjct 56139 TAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAGG 56080 Query 116573 GCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACA 116631 | | || ||||| ||||| | || ||||| | | ||| | | | | || | | | Sbjct 56079 GATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTG-ATA 56021 Query 116632 GTGGCGTTGGCTCGCCCCT------CCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCT 116685 || ||| || |||| ||| ||||| |||||| ||||| ||||| Sbjct 56020 GT---CTTG---CGACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCC 55967 Query 116686 TCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCA 116745 || || | | |||| | ||||| | | || || | ||||| ||| | ||| Sbjct 55966 TCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCA 55907 Query 116746 CCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGA 116805 || ||||| ||||||||||| || || || ||||| | || |||||||||| || Sbjct 55906 TTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGT 55847 Query 116806 CAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCG 116865 ||| ||||||| | || ||||| || | || | || || | | |||||| Sbjct 55846 GCACGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCA 55787 Query 116866 TGCCACGGTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACA 116922 ||||| || || ||||| || || | | || || | |||| | || | ||| Sbjct 55786 TGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACA 55727 Query 116923 TACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTT 116982 || || || || ||| || || || ||||| |||| |||||| | ||| | || || Sbjct 55726 TATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATACCGTTAGAGTTTCCGTTG 55667 Query 116983 GTCCCCCGAA--TACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCC 117040 || || || || | | | | || | || ||| |||| | ||||||||| | Sbjct 55666 GTACCGGCAATGTATGCGCC--AGTAGCACGGATTCGGTGAATGTTGAGACCAATACCAC 55609 Query 117041 CTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGT 117100 | || ||||||||| || || | | | | | |||| || ||||| || || Sbjct 55608 CGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTGT 55549 Query 117101 CACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGA 117160 | |||| | |||| |||||||| || | ||||| ||| ||||| || || Sbjct 55548 CCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGA 55489 Query 117161 AGAGGGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTATCGTAGGTCTCCAAG 117219 |||| ||||| | || || |||| ||| | | |||||| | ||| || || | Sbjct 55488 AGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACATCAAGTTGTATGTTTCGATA 55430 Query 117220 ACAGAGGGAATGTCTTCCCCGTGAATACCGATTGAGACCCGCATAAACATGTATTGGGG 117278 || ||| || || ||||||||||| | | || ||||| | ||| | ||| || Sbjct 55429 GCACTTTCAATATCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTGG 55371 >seq35 Length=307329 Score = 111 bits (122), Expect = 2e-19 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 127531 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 127590 ||||||||| |||||||||||||||||||| || |||||| || || | ||| ||||| Sbjct 74255 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACC 74196 Query 127591 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 127650 |||||||| | |||||| || | || || || ||||||||||| || || || Sbjct 74195 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGC 74136 Query 127651 CGCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCAT 127707 ||||| || | ||||| | ||||||| ||| || |||| || ||| || | Sbjct 74135 AGCGAATGCGACAAGACGTTGAGCAAAGG---TGGAGTTCTTATCTTGAATCCATTTGAC 74079 Query 127708 CGCCCACTGTGCCTTTTTCTCGATACATGGGAC 127740 ||||| | ||||| |||| ||| || || || Sbjct 74078 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503933074160