Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq18 138 1e-27
seq3 96.9 4e-15
>seq18
Length=865119
Score = 138 bits (152), Expect = 1e-27
Identities = 160/216 (74%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| ||||||| || | || |||||||||||| ||||| ||||| || ||||| |
Sbjct 543462 ACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCC 543403
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
|| ||||| ||||| |||||||| ||||| ||||| ||||||| || | | ||||||
Sbjct 543402 ATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTT 543343
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| |||||| ||||| | | | |||||| || || || || | |||||
Sbjct 543342 GTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGAT 543283
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|||||||||||| || || || || ||||| |||||
Sbjct 543282 GGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 543247
>seq3
Length=2676204
Score = 96.9 bits (106), Expect = 4e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437
||| | ||||| ||||| || || |||||||| |||||||| || || || || | |
Sbjct 1949562 ACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCC 1949621
Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497
||| || | ||||| || || || ||||| || || || || | || | || ||||||
Sbjct 1949622 GTCCTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTT 1949681
Query 46498 GTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
|||| ||||| || | | | | || || ||||||||| || | || ||
Sbjct 1949682 GTCCTGAATCTTTGATTTTACATTATCAATGGTATCTGACGATTCCACCTCTAATGTAAT 1949741
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
||| ||||| |||| || || ||||||||||||||
Sbjct 1949742 GGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565235390105520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |