Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq3 123 1e-22
seq17 89.7 2e-12
seq13 86.0 2e-11
>seq3
Length=2676204
Score = 123 bits (136), Expect = 1e-22
Identities = 152/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 391060 TCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTG 391119
||||||| || || || || || || || || ||||| || ||||| || || | ||| |
Sbjct 1950223 TCGTTAAGACTCTTACCGGAAAGACCATCACCCTTGAGGTCGAATCTTCAGACACCATCG 1950164
Query 391120 AAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAA 391179
| |||| || |||||||| |||||||| |||||||| || ||||||||||| |
Sbjct 1950163 ACAACGTTAAGTCTAAGATTCAAGACAAGGAAGGCATTCCTCCCGACCAACAACGTTTGA 1950104
Query 391180 TTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGG 391239
||||| | || || ||||| ||||| || | || | | ||||||||||| | ||||
Sbjct 1950103 TTTTCGCTGGAAAGCAACTGGAAGACGGTCGCACCCTTTCCGATTATAATATCCAGAAGG 1950044
Query 391240 ATGCAACACTTCACTTAGTATTAAGACT 391267
| | || |||||||| || | |||||
Sbjct 1950043 AGTCTACCCTTCACTTGGTCCTCAGACT 1950016
Score = 114 bits (126), Expect = 5e-20
Identities = 140/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || || || || || ||||||| || || ||||| | || || ||||| ||
Sbjct 1949777 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACCATTACATTAGAGGTGGAATCGTCA 1949718
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| |||||| | | ||| ||| ||||| || ||||| || ||||| |||||||||
Sbjct 1949717 GATACCATTGATAATGTAAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 1949658
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
||||| || || || |||| || ||| | || || || ||||| | ||||||| |||
Sbjct 1949657 CAACGATTGATCTTTGCAGGAAAGCAATTGGAGGACGGCAGAACCCTTTCGGATTACAAT 1949598
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 1949597 ATTCAAAAGGA 1949587
Score = 105 bits (116), Expect = 3e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109
||| | || ||||| || || || || || || || || ||| | || |||||||||||
Sbjct 1950005 ATGCAGATCTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG 1949946
Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169
|||| ||| || | | || ||| || ||||||||||| || || || || ||||||
Sbjct 1949945 GATACCATCGACAATGTGAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 1949886
Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229
|||||| | || || | || || |||||||| ||||| | || | ||||||| ||
Sbjct 1949885 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGTCGTACACTTTCGGATTACAAC 1949826
Query 391230 ATTGATAAGGA 391240
||| | |||||
Sbjct 1949825 ATTCAAAAGGA 1949815
Score = 96.9 bits (106), Expect = 1e-14
Identities = 139/196 (71%), Gaps = 0/196 (0%)
Strand=Plus/Minus
Query 391072 TGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGATAACATTGAAGCTATTAAAC 391131
|||| ||||| |||||||| || || ||||| || || | ||| || | | ||
Sbjct 1950494 TGACCGGTAAGACTATTACCCTCGAGGTTGAGTCCAGCGACACCATCGACAATGTCAAGT 1950435
Query 391132 AAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGA 391191
|| || || || ||||| ||||||||||| || ||||| ||||| |||||| | || |
Sbjct 1950434 CCAAGATCCAGGACAAGGAGGGAATTCCTCCCGACCAACAGCGTTTGATTTTCGCCGGAA 1950375
Query 391192 AACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTC 391251
|||||||||||||||| | || ||| || || || || | || || | || || |
Sbjct 1950374 AACAACTTGAAGATGGTCGCACCTTGAGTGACTACAACATCCAGAAAGAGTCTACTCTCC 1950315
Query 391252 ACTTAGTATTAAGACT 391267
|||| || | |||||
Sbjct 1950314 ACTTGGTCCTCAGACT 1950299
>seq17
Length=875485
Score = 89.7 bits (98), Expect = 2e-12
Identities = 132/187 (71%), Gaps = 0/187 (0%)
Strand=Plus/Plus
Query 391053 AATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCTGAT 391112
|||| ||||| || || || || || || || || || ||||| || || || || ||
Sbjct 658059 AATAGCTTCGTCAAGACCCTTACGGGCAAGACCATCACCCTTGAGGTCGAGTCCTCCGAC 658118
Query 391113 AACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAACAA 391172
| ||| || | | || || || || || ||||| ||||||||||| |||||||||
Sbjct 658119 ACCATCGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGAATTCCTCCCGATCAACAA 658178
Query 391173 CGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAATATT 391232
||||| || ||| | || || ||| | ||||| ||| | ||| | | ||||| || ||
Sbjct 658179 CGTTTGATCTTCGCTGGAAAGCAATTGGAAGACGGACGTACTCTCTCAGATTACAACATC 658238
Query 391233 GATAAGG 391239
| ||||
Sbjct 658239 CAAAAGG 658245
>seq13
Length=1254118
Score = 86.0 bits (94), Expect = 2e-11
Identities = 238/362 (66%), Gaps = 6/362 (2%)
Strand=Plus/Plus
Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301
||||||| || |||| | ||| |||| || ||||| ||| || ||| |||
Sbjct 582346 CTCCTGAGGAGGTTTCCGCCATGATTCTCGGAAAGATGAAGGAAGTCGCCGAATCATACC 582405
Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361
| || | ||||| | ||||| |||||||||| || || ||||| || |||
Sbjct 582406 TCGGAAAGACTGTTACCCACGCAGTTGTTACTGTTCCAGCCTACTTCAACGACAACCAAA 582465
Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421
| ||||| || || ||||| || ||||| ||||| || ||||| || || | || |
Sbjct 582466 GACAAGCCACCAAGGATGCCGGTATCATTGCCGGTTTGAACGTTCTCCGTATCGTCAACG 582525
Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481
||||||| || || ||| | || || || | ||| || | ||| ||| |||
Sbjct 582526 AACCTACCGCCGCAGCTATTGCCTACGGTTT-GGACAAG--ACTGAAGGTGAACGTCAAA 582582
Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541
|||| || | |||| | ||||||||||| ||| |||| | || || |||||
Sbjct 582583 TTATT---GTCTATGATCTCGGTGGAGGAACCTTCGATGTTTCTCTTCTCTCCATTGATC 582639
Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601
||| || ||||| || | || ||||| ||||| | ||||| |||||| | |
Sbjct 582640 GTGGTGTCTTTGAGGTTCTTTCTACTGCCGGTGACACTCACTTGGGAGGAGAAGATTTCG 582699
Query 451602 AT 451603
||
Sbjct 582700 AT 582701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975707616282008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |