Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq38 228 1e-54 seq35 134 2e-26 >seq38 Length=269250 Score = 228 bits (252), Expect = 1e-54 Identities = 1124/1749 (64%), Gaps = 65/1749 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 ||||| | ||| ||||||| || || | ||||| || || || |||||||| || | Sbjct 55371 CCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATTGAAAGTGCT 55430 Query 111672 TTGGAGACATACGACAAGATGTCCCGTG-GTATGTTCATCCACGCAACACCAACCCTCTT 111730 | || |||||| || |||||| ||| |||| || || | ||||| ||||| Sbjct 55431 ATCGAAACATACAACTTGATGTCAAACAAGTAC-TTCACACATGCCTCGCCAACACTCTT 55489 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 | || ||||| ||| | | ||| | || || |||||||| | | |||||||| Sbjct 55490 CTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAGGAGGA 55549 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 || |||| ||||||| ||| | | ||||| ||||||||| || || Sbjct 55550 CAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAATGCCGG 55609 Query 111851 TGGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACA 111908 |||||| || | |||| || || | || | | | | || || ||||| Sbjct 55610 TGGTATTGGTCTCAACATTCACCGAATCCGTGCTACT--GGCGCATACATTGCCGGTACC 55667 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || | || | ||||| |||| ||||| || || || ||| ||| || | ||| Sbjct 55668 AACGGAAACTCTAACGGTATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATAT 55727 Query 111969 GTAAACCAAGCTGG------GCGTCGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || | |||| ||| ||||| || | | || || || |||||||||||| Sbjct 55728 GTTGATCAAGGTGGTAATAAGCGTCCT---GGTGCCTTTGCTGTTTACCTTGAGCCATGG 55784 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGG 112082 || |||||| | | ||||||||||| | || || || || | || || | || Sbjct 55785 CATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAAGAAGAAGTTCG- 55843 Query 112083 TGC-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGA 112141 ||| ||||||||||||| ||| | |||||||| ||||| ||||||||| | ||||| | Sbjct 55844 TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAA 55903 Query 112142 GAGTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGATGCCGTGGG 112201 || ||| ||||| ||||| | || || || | || ||| | | |||| || Sbjct 55904 GAATGGGGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTATGG 55963 Query 112202 TGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGC--GACG 112259 |||||||| || || |||||| ||||| ||| || | | | | || ||| Sbjct 55964 CGAGGAGTTCGAGGCTCTCTACGAGGGTTACGA-AAAGGCAGGCAAGGGTC-GCAAGACT 56021 Query 112260 GTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCA 112319 | ||| | | ||| | | ||||| || ||||||||||||| || | || Sbjct 56022 ATCAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATCCC 56081 Query 112320 TATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATC 112379 | ||||||||||| || || || ||| | ||||| || |||||||| ||||| || Sbjct 56082 TTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGTACTATT 56141 Query 112380 AAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTG 112439 || ||||| | || ||||||||| | || | | | ||||||| ||| Sbjct 56142 CGCAGCTCCAATTTGTGCACAGAAATCGTTGAGTACTCTGCACCAGATGAGGTTGCTTGC 56201 Query 112440 TGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTTGA 112498 |||||| | || || |||||| | |||| | | | | || | | || | ||| Sbjct 56202 TGTAACTTGGCTTCCATCGCT-TTACCAACTTTCGTCAACATGAATGAGGGAACTTATGA 56260 Query 112499 TTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTATTGA 112558 || |||| || ||||| ||| || ||| | |||| | || | ||||||| Sbjct 56261 TTTCCAAAAGCTTCACGAGGTTGTCCAAGTTGTTGTTAGAAACTTGAATAAGATTATTGA 56320 Query 112559 TAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTG 112617 | || | || || || | ||| || || ||| ||| | | || || || || | Sbjct 56321 CATCAACTACTATCCAGTCGCAGA-GGCCCGAAAAAGCAATTTCCGTCATCGACCTATCG 56379 Query 112618 GTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGATT 112674 | | ||||| |||||||| || |||| ||| | |||| ||| | ||||||| | Sbjct 56380 CTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTTGACT 56436 Query 112675 CCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTG 112734 | ||||| || | |||| | || || ||||| || || ||||| || |||| Sbjct 56437 CTCCAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGCTGC-CTTG 56495 Query 112735 AGGCGAGTTCG--GAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCC 112792 | | | || ||| | ||| ||| ||| ||||| ||||||| | | || || || Sbjct 56496 A-CCTCTTCCGTCGAGATCGCAAAGGAACTTGGCCCATACGAAACCTATCAAGGCTCCCC 56554 Query 112793 AGCTTCACAAGGGGTG--CTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TCACT 112848 || || | | ||||| ||||||| |||||||||| ||| | ||| | || | | Sbjct 56555 AG--TCTCTAAGGGTGAACTTCAATACGATATGTGGG-GGGTTACACCTA-CTGATTTGT 56610 Query 112849 ACGACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGA 112908 || |||||| || | ||| || ||||||| | | || | || ||| ||| | Sbjct 56611 GGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACTCTCTCCTAG 56670 Query 112909 TGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTTGAA 112967 | ||||| ||||| || || ||| | |||| |||||| | || ||||| || ||| Sbjct 56671 TTGCACCTATGCCTACTGCTAGCACATCCCAAATTCTTGGCT-TCAACGAATGTTTCGAA 56729 Query 112968 CCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAA 113026 || ||||| | |||||||| ||| | | || || ||||| || | || || Sbjct 56730 CCTTACACTTCAAACATCTACTCT-CGTCGTGTTCTTGCCGGAGAATTCCAAGTCGTTAA 56788 Query 113027 --CA-AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAGGA 113083 || || |||| | ||||| || || ||||||||||| | |||||||| | Sbjct 56789 TCCATGGCTTCTC---AAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATATGAAGAA 56845 Query 113084 ---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAGATGAAA 113139 | ||| || ||| ||||| |||||||||||||| ||||||||| ||| | Sbjct 56846 CCGTATCATTGCTGA----TGGTGGATCCATTCAAAATATCCCCAATATTCCAGCTGACA 56901 Query 113140 TTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACATGGC 113197 | ||| | ||| || |||||||||| || | ||| | | || | ||||| Sbjct 56902 TCAAGGCTCTTTACAAGACTGTTTGGGAAATCTCCCAACGAACAA--TTGTTCAAATGGC 56959 Query 113198 CGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGAAAGTCC 113257 || ||||||||| |||||||||||| |||| ||||| | |||| | ||| Sbjct 56960 TGCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATTCACATGAAGGATCC 57019 Query 113258 AACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAACGGG 113317 || ||| |||| | | || ||||| | ||||||| |||| | || || || Sbjct 57020 TACAATGGGCAAGATTACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGACCGG 57079 Query 113318 GATGTATTA 113326 ||||| || Sbjct 57080 AATGTACTA 57088 >seq35 Length=307329 Score = 134 bits (148), Expect = 2e-26 Identities = 159/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 102110 AGTTCCATGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 102166 |||||| || || | ||||| || || |||||| | || ||| || |||| || || Sbjct 74045 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTC 74104 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 |||||||| | || || ||||||| || ||||| || ||||||||||| || Sbjct 74105 CA---CCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGG 74161 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 |||||| | |||| | |||||||||||||| ||||| ||| | || ||| |||||| Sbjct 74162 ATCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTC 74221 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 102320 |||||| || ||||| |||||||| || |||||| Sbjct 74222 CAACGAACTCATCTCCCGTGACGAAGGTCTCCAC 74255 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 102546 AATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAG 102605 || |||||||||||||||||||||||| | | | ||| ||||| ||||||||||||||| Sbjct 74481 AACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTAACTTCTTCGAAAAG 74540 Query 102606 AGGGTTGGGGACTA 102619 || ||||| || || Sbjct 74541 AGAGTTGGTGATTA 74554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620739094546720