Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_014767.1
Length=184095
Score E
Sequences producing significant alignments: (Bits) Value
seq38 226 3e-54
seq35 86.0 7e-12
>seq38
Length=269250
Score = 226 bits (250), Expect = 3e-54
Identities = 1120/1748 (64%), Gaps = 55/1748 (3%)
Strand=Plus/Minus
Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559
|||||| || ||||| ||||| |||||| |||||||||||| ||||| | | ||
Sbjct 57002 GTTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACAATTGT 56943
Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619
|||| |||||||| ||||||||||| | | |||||| ||| | ||||| |
Sbjct 56942 TCGTTGGGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGG 56883
Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGACC 109675
||| |||||||| || |||||| ||| || ||| | | |||||| | | ||||
Sbjct 56882 GATATTTTGAATGGATCCACCA----TCAGCAATGATACGGTTCTTCATATTGTCAGACC 56827
Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAGATGCT-TG--TTGACCACGACAAATTCAC 109732
||||||| | | | || | ||| ||| || || || || || ||||| |
Sbjct 56826 AGAGACCCA---TATCGACAAGGTCCTTGAGAAGCCATGGATTAACGACTTGGAATTCTC 56770
Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792
| ||||| || || ||||||||| | ||||| ||||||||||| || ||| ||
Sbjct 56769 CGGCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGC 56710
Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852
| || ||||| | ||| ||| || ||||| || || | || ||| ||| |||| |
Sbjct 56709 CAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTC 56650
Query 109853 CCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAA--ATTTAGT 109910
| | ||| | | || | ||||||||| |||| || | | ||
Sbjct 56649 CGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATC-------CCACAAATCAGTAGGT 56597
Query 109911 CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAAC- 109969
| ||| |||||||||| ||||||| |||||| || | || || || |||| |
Sbjct 56596 GTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCC-TTGATAGG 56539
Query 109970 TCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCGCATGATAC 110028
| ||||| | || ||| || | |||| |||| || || || || || ||
Sbjct 56538 TTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGGTCAAG-GCAGCGTGGTAG 56480
Query 110029 ATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA 110088
|| ||||| ||||| || || | | | | ||| | |||| || ||||||| |
Sbjct 56479 ATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGAGAGTCAAATGGAAGACGA 56420
Query 110089 CAAAG--AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCA 110146
| || || ||| |||| || ||||| |||||||| | | | || || ||||| |
Sbjct 56419 -AGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGA 56362
Query 110147 TGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206
|| ||| || | | || || || ||||| ||| || | | ||| | |
Sbjct 56361 AATTGCTTTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGT 56302
Query 110207 TCTTCGTCACAGTCTTCGTGATT-TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC 110265
| | ||| ||| | | || || || || | | |||| | ||| | | |
Sbjct 56301 TTCTAACAACAA-CTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTC 56243
Query 110266 TTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325
| ||||| | | || | ||| || || || | || || || | ||| |||
Sbjct 56242 ATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGT 56183
Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385
| | ||| || | ||||| || ||||| ||||| || ||| ||||| ||||||
Sbjct 56182 GCAGAGTACTCAACGATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTT 56123
Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445
|| || || ||||||||||||||| || |||||| | || | || || || ||
Sbjct 56122 TGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTT 56063
Query 110446 TGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGAGAC 110503
|| | || ||||||| | ||| | | || || ||| |||| | | |
Sbjct 56062 TGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATAGTCTTGCG--ACCCTTGC 56005
Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGAC 110563
|| ||| ||||| ||| | |||| || |||| || || ||||| | | ||
Sbjct 56004 CTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAAC 55945
Query 110564 CCTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATG 110622
| | | || || ||| || | ||| | ||||| ||| || ||||| | |||||||
Sbjct 55944 C-TGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATG 55886
Query 110623 AACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCT 110682
|| || ||||||||||||| || |||| || || || |||| | ||||| | ||
Sbjct 55885 AATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCTTTGCCA 55826
Query 110683 TGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACA 110742
|| || |||||| || | || || | | ||||| |||||||| || || || |||
Sbjct 55825 TGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACA 55766
Query 110743 GCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAG 110799
|| | || || ||| | ||| | || | |||||| | || ||| |||||
Sbjct 55765 GCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAA 55706
Query 110800 ACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTT 110858
|| | ||||||||||| || || | || | || || ||||| ||| | || |
Sbjct 55705 ACTCGGAGCATAGGAACGATACCGTTAGAGTTTCCGTTGGTACCGGCAATGTATGCGC-C 55647
Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918
| | ||||| || ||| || | | |||||||||||| || ||| || ||
Sbjct 55646 AGTAGCACGGATTCGGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGC 55587
Query 110919 AC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977
|| | ||| | | ||| | |||||||||||||| || |||| || | || || |
Sbjct 55586 ACAAATCT-TCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGA 55528
Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037
|||| || || | || | | || || |||||| ||||||||| || | |||||
Sbjct 55527 AGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTG 55468
Query 111038 TGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACC 111095
||| || |||| |||||| ||||||||| |||| || | ||| | |||
Sbjct 55467 TGA--AGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCAATATCATCACC 55410
Query 111096 GTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTTTCGATTAGCTTT-CCA 111153
||||||||||| |||||| ||||||| ||| | ||| || |||| | | |||| |||
Sbjct 55409 GTGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTG--CAACTTTGCCA 55352
Query 111154 TCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAA 111213
|||| ||| ||||||| ||| || || |||| ||||||||| | | | ||||
Sbjct 55351 TCAAGACGTAGAAGGTATGAACGCTCGAGAGTTTTGAATCCAAAGTATTGATAGTTGAAA 55292
Query 111214 TCACGATC 111221
|| || ||
Sbjct 55291 TCTCGGTC 55284
>seq35
Length=307329
Score = 86.0 bits (94), Expect = 7e-12
Identities = 148/210 (70%), Gaps = 5/210 (2%)
Strand=Plus/Minus
Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567
|| || ||||| || || |||||||| || || |||| ||||| | ||| || ||
Sbjct 74254 TGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACCA 74195
Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627
| ||||| ||||| ||||| | || ||| || ||||||||||| || ||
Sbjct 74194 CGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGCA 74135
Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC--GAA-CCACTTGAGAGC 119683
||||| |||| ||||| | ||| |||||| ||| ||| || ||| ||| |||| |||
Sbjct 74134 GCGAATGCGACAAGACGTTGAGC-AAAGGTGGAGTTCTTATCTTGAATCCATTTGACAGC 74076
Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713
||||| |||||| || ||||| || ||
Sbjct 74075 CCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588972863702800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |