Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq38 226 3e-54 seq35 86.0 7e-12 >seq38 Length=269250 Score = 226 bits (250), Expect = 3e-54 Identities = 1120/1748 (64%), Gaps = 55/1748 (3%) Strand=Plus/Minus Query 109500 GTTCATCGACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGATACA 109559 |||||| || ||||| ||||| |||||| |||||||||||| ||||| | | || Sbjct 57002 GTTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACAATTGT 56943 Query 109560 CTTTTGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCAC 109619 |||| |||||||| ||||||||||| | | |||||| ||| | ||||| | Sbjct 56942 TCGTTGGGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGG 56883 Query 109620 GATGTTTTGAATAGAGCCACCAGCCTTCACCA-TGAGA---TCCTTCATCTCTTTCGACC 109675 ||| |||||||| || |||||| ||| || ||| | | |||||| | | |||| Sbjct 56882 GATATTTTGAATGGATCCACCA----TCAGCAATGATACGGTTCTTCATATTGTCAGACC 56827 Query 109676 AGAGACCGACCTTTTTGAGATCGTCAACAAGATGCT-TG--TTGACCACGACAAATTCAC 109732 ||||||| | | | || | ||| ||| || || || || || ||||| | Sbjct 56826 AGAGACCCA---TATCGACAAGGTCCTTGAGAAGCCATGGATTAACGACTTGGAATTCTC 56770 Query 109733 CAGCAAGTGTGCGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGC 109792 | ||||| || || ||||||||| | ||||| ||||||||||| || ||| || Sbjct 56769 CGGCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGC 56710 Query 109793 CTAGGATTTGTGCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGAC 109852 | || ||||| | ||| ||| || ||||| || || | || ||| ||| |||| | Sbjct 56709 CAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTC 56650 Query 109853 CCTTCGTCTTTACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAA--ATTTAGT 109910 | | ||| | | || | ||||||||| |||| || | | || Sbjct 56649 CGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATC-------CCACAAATCAGTAGGT 56597 Query 109911 CTCACCATCCCACATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAAC- 109969 | ||| |||||||||| ||||||| |||||| || | || || || |||| | Sbjct 56596 GTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCC-TTGATAGG 56539 Query 109970 TCTCGTACGACCCCTCAACCTCGGCCAACTCGGATGAAGCC-TCTAGTGCCGCATGATAC 110028 | ||||| | || ||| || | |||| |||| || || || || || || Sbjct 56538 TTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGGTCAAG-GCAGCGTGGTAG 56480 Query 110029 ATAGTCTCAAAAATATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCA 110088 || ||||| ||||| || || | | | | ||| | |||| || ||||||| | Sbjct 56479 ATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGAGAGTCAAATGGAAGACGA 56420 Query 110089 CAAAG--AATAAACACATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCA 110146 | || || ||| |||| || ||||| |||||||| | | | || || ||||| | Sbjct 56419 -AGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGA 56362 Query 110147 TGTTAGAGCGTCGAGCAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGAT 110206 || ||| || | | || || || ||||| ||| || | | ||| | | Sbjct 56361 AATTGCTTTTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGT 56302 Query 110207 TCTTCGTCACAGTCTTCGTGATT-TCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCC 110265 | | ||| ||| | | || || || || | | |||| | ||| | | | Sbjct 56301 TTCTAACAACAA-CTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTC 56243 Query 110266 TTATTGACATATTTGGGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTG 110325 | ||||| | | || | ||| || || || | || || || | ||| ||| Sbjct 56242 ATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGT 56183 Query 110326 TCGGTGTATTCCAAAATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTC 110385 | | ||| || | ||||| || ||||| ||||| || ||| ||||| |||||| Sbjct 56182 GCAGAGTACTCAACGATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTT 56123 Query 110386 TGATTCGATTTGGAGTTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTC 110445 || || || ||||||||||||||| || |||||| | || | || || || || Sbjct 56122 TGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTT 56063 Query 110446 TGTGACTTGAGAATGGCCTTCCATACATCGGCGGCGGGGACAGT--TGCGTTAGCGAGAC 110503 || | || ||||||| | ||| | | || || ||| |||| | | | Sbjct 56062 TGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGATAGTCTTGCG--ACCCTTGC 56005 Query 110504 CTTCCTCCTCGTACTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGAC 110563 || ||| ||||| ||| | |||| || |||| || || ||||| | | || Sbjct 56004 CTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAAC 55945 Query 110564 CCTTCGCCTT-GTCGGGACAGAAGAGGGACCAATTTCCACCCTCCTCAACCCTCTTCATG 110622 | | | || || ||| || | ||| | ||||| ||| || ||||| | ||||||| Sbjct 55944 C-TGGACATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATG 55886 Query 110623 AACAGGTCAGGAATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCT 110682 || || ||||||||||||| || |||| || || || |||| | ||||| | || Sbjct 55885 AATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCTTTGCCA 55826 Query 110683 TGGTTGAGGCGTAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACA 110742 || || |||||| || | || || | | ||||| |||||||| || || || ||| Sbjct 55825 TGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACA 55766 Query 110743 GCGATGGATCCCTTACG---ACGACCCGCCTGGTTAACATAGCGTGCTGTGGCATTGAAG 110799 || | || || ||| | ||| | || | |||||| | || ||| ||||| Sbjct 55765 GCAAAGGCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAA 55706 Query 110800 ACCCTGAGCATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAAT-TCTGGACTT 110858 || | ||||||||||| || || | || | || || ||||| ||| | || | Sbjct 55705 ACTCGGAGCATAGGAACGATACCGTTAGAGTTTCCGTTGGTACCGGCAATGTATGCGC-C 55647 Query 110859 ATTGGCACGAATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGC 110918 | | ||||| || ||| || | | |||||||||||| || ||| || || Sbjct 55646 AGTAGCACGGATTCGGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGC 55587 Query 110919 AC-ACTCTGTGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAA 110977 || | ||| | | ||| | |||||||||||||| || |||| || | || || | Sbjct 55586 ACAAATCT-TCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGA 55528 Query 110978 AGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAA 111037 |||| || || | || | | || || |||||| ||||||||| || | ||||| Sbjct 55527 AGCATGATGAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTG 55468 Query 111038 TGAACAGACCTTG--GGACATCTTGTTGTATGTGTCGAGTGCGGAGGGTACATCTTTACC 111095 ||| || |||| |||||| ||||||||| |||| || | ||| | ||| Sbjct 55467 TGA--AGTACTTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCAATATCATCACC 55410 Query 111096 GTGAATACCAATGGCAACTCGCATGAACATATATTGAGG-CGTTTCGATTAGCTTT-CCA 111153 ||||||||||| |||||| ||||||| ||| | ||| || |||| | | |||| ||| Sbjct 55409 GTGAATACCAACGGCAACACGCATGATCATTTGTTGTGGACGTTCTG--CAACTTTGCCA 55352 Query 111154 TCAACACGCTGAAGGTAACTCTTCTCTAGGGTCTTGAGACCAAAGTATCCAAAATCGAAA 111213 |||| ||| ||||||| ||| || || |||| ||||||||| | | | |||| Sbjct 55351 TCAAGACGTAGAAGGTATGAACGCTCGAGAGTTTTGAATCCAAAGTATTGATAGTTGAAA 55292 Query 111214 TCACGATC 111221 || || || Sbjct 55291 TCTCGGTC 55284 >seq35 Length=307329 Score = 86.0 bits (94), Expect = 7e-12 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || ||||| || || |||||||| || || |||| ||||| | ||| || || Sbjct 74254 TGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACCA 74195 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| ||||| | || ||| || ||||||||||| || || Sbjct 74194 CGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGCA 74135 Query 119628 GCGAAAGCGAATAGACGCTCAGCAAAAGGTCGAG-ACTTGTC--GAA-CCACTTGAGAGC 119683 ||||| |||| ||||| | ||| |||||| ||| ||| || ||| ||| |||| ||| Sbjct 74134 GCGAATGCGACAAGACGTTGAGC-AAAGGTGGAGTTCTTATCTTGAATCCATTTGACAGC 74076 Query 119684 CCAGTTGGCCTTACGCTCTATGCAGGGGAC 119713 ||||| |||||| || ||||| || || Sbjct 74075 CCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972863702800