Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq38 257 2e-63
seq35 95.1 1e-14
>seq38
Length=269250
Score = 257 bits (284), Expect = 2e-63
Identities = 1175/1825 (64%), Gaps = 55/1825 (3%)
Strand=Plus/Minus
Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640
||| ||| || | ||||||||| |||||||| | || |||||| | | ||||
Sbjct 57103 GCCATAGTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGC 57044
Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700
|| || | | |||| ||| || ||| | |||| || ||||| |||| ||
Sbjct 57043 ATGGATGTAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGA 56984
Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCC 105758
|||||||| |||||| | || ||||| | || | | ||| | || ||||||
Sbjct 56983 TCAATGAATGCACCACGATCAGCAGCCATTTGAACAA--TTGTTCGTTGGGAGATTTCCC 56926
Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAAC 105818
| || || ||| ||| |||||| ||| |||| |||| | |||||||||||| || |
Sbjct 56925 AAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATC 56866
Query 105819 CCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGAT 105878
| || | | || | | |||||||| | ||||| ||||| || | || |
Sbjct 56865 CACCATCAGCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGT 56806
Query 105879 CATTGACGAGATGCTTG--TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-T 105935
| |||| || | || || || | || ||||| || || | | ||| |
Sbjct 56805 CCTTGAGAAGC--CATGGATTAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGT 56749
Query 105936 AGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAG 105994
||||||| | ||||| ||||| || ||||| || | |||||| |||| | |||
Sbjct 56748 AGATGTTTGAAGTGTAAGGTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTA 56690
Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054
|| || ||||| ||||| | | ||| ||| || | || | || ||||||| || |
Sbjct 56689 GCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGC 56630
Query 106055 TTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112
|| | | ||||| || | | || | ||| | ||| |||||||||| ||||||
Sbjct 56629 TTCAAAGAGTCCCAATCCCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAA 56572
Query 106113 G--CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170
| ||||| | | ||| ||||| || | | | || || || | || | | | ||
Sbjct 56571 GTTCACCCTTAGAGACTGGGGAG--CCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGC 56514
Query 106171 CAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229
| || || | || ||| | ||||| || ||||| || || || | || |
Sbjct 56513 GATCTCGACGGAAGAGGTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGTATGTTGA 56455
Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAG 106287
| |||||||| || ||||||| | || | | | || ||| |||| || ||
Sbjct 56454 GGTGTTTGGCTTCTGGAGAGTCAAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAG 56397
Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAA 106346
|||||||||||| | | | ||||||| || || | ||| ||||| || ||| | |
Sbjct 56396 ACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGA 56338
Query 106347 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT- 106405
| ||||| | || ||||||| | || | ||| | ||||| ||| | |
Sbjct 56337 CTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAACAACAA-CTTGGACAACC 56279
Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGG 106462
|| ||||| |||| ||||| |||| | ||| ||||| |||| | |||| |
Sbjct 56278 TCGTGAAGCTTTTGGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAA 56222
Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522
||||| || ||||| || || ||| |||||| | | |||||| | ||||||
Sbjct 56221 GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCAACGATTTCT 56162
Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582
|| ||||| ||||| || ||| || |||| ||||||||||| ||||| ||||||||
Sbjct 56161 GTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAT 56102
Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642
||||||||||| |||||| |||| | || ||||| || || | || ||||| | | |
Sbjct 56101 GCATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTAC 56042
Query 106643 CACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTG 106699
|| | | || || || | || | ||| | ||| || ||||| |
Sbjct 56041 CAAAGTTTTTGAGCCTTGATAGTCTTGC---GACCCTTGCCTGCCTTTTCGTAACCCTCG 55985
Query 106700 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759
||||| || || |||||||| || | || | | |||||| | || || ||
Sbjct 55984 TAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCAC 55925
Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819
| |||| ||| | ||| || ||||| ||||||||||| || || |||||||||| |
Sbjct 55924 ATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAG 55865
Query 106820 GATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 106878
| | |||||||| | | || ||| | ||||| | || || || |||| |||||
Sbjct 55864 GCGTAGAAGAGATCGCGTGCA-CGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAG 55806
Query 106879 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 106938
|||||| | | |||||| |||||||||||||| || || || | | || ||||
Sbjct 55805 GAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACC---AGGACG 55749
Query 106939 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992
| ||| |||||| ||||| | || ||| ||| || || || ||||| ||||
Sbjct 55748 CTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAAC 55689
Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052
||||| | || | || || || || ||| | | | || | | ||
Sbjct 55688 GATACCGTTAGAGTTTCCGTTGGTACCGGCAATGTATGCGCCAGTAGCACGGATTCGGTG 55629
Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112
|||| | |||||||| || || ||||||||| ||||| | | | ||| |
Sbjct 55628 AATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATC 55569
Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172
|| ||||| | || ||||||||| || ||||||||||||| || | || |
Sbjct 55568 GTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGC 55509
Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACA 107231
| ||| ||||| ||| |||||| ||||| | || || |||| ||| | | ||||
Sbjct 55508 TTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACA 55450
Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291
|| || |||||| || | || ||||| || || ||||| || || | ||| ||||
Sbjct 55449 TCAAGTTGTATGTTTCGATAGCACTTTCAATATCATCACCGTGAATACCAACGGCAACAC 55390
Query 107292 GCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCT 107351
|||| | ||| | ||| || ||| | ||||||| || ||| |||| ||
Sbjct 55389 GCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAAGGTATGAAC 55330
Query 107352 TCTCAAGGGTTTTGAGACCAAAGTA 107376
||| || ||||||| ||||||||
Sbjct 55329 GCTCGAGAGTTTTGAATCCAAAGTA 55305
>seq35
Length=307329
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344
||||||||| || || ||||| || ||||| || |||||| || || | ||| |||||
Sbjct 74255 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACC 74196
Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404
|||||||| | ||| | |||| | ||| || |||||||||||||| || || ||
Sbjct 74195 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGC 74136
Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAG-ACTTTGTGTCAAACCATTTCATTG 117463
|| || || | ||| || | || |||| | ||| ||| | || |||||| | |
Sbjct 74135 AGCGAATGCGACAAGACGTTGAGCAAAGGTG-GAGTTCTTATCTTGAATCCATTTGACAG 74077
Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTAC 117494
|||| | |||||||||| || || || ||
Sbjct 74076 CCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589977658352240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |