Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq38 257 2e-63 seq35 95.1 1e-14 >seq38 Length=269250 Score = 257 bits (284), Expect = 2e-63 Identities = 1175/1825 (64%), Gaps = 55/1825 (3%) Strand=Plus/Minus Query 105581 GCCTTAGATCGGAGATAGTACATCCCGGTCTTGAGTCCTTGTTTCCACGCGTACATATGC 105640 ||| ||| || | ||||||||| |||||||| | || |||||| | | |||| Sbjct 57103 GCCATAGTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGC 57044 Query 105641 ATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGAAAAGATTCATACTTTGACTCTGG 105700 || || | | |||| ||| || ||| | |||| || ||||| |||| || Sbjct 57043 ATGGATGTAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGA 56984 Query 105701 TCAATGAAGCGACCACGTTGTGCCGCCATATCAATGACATCCTTCATCTTGA--TTTCCC 105758 |||||||| |||||| | || ||||| | || | | ||| | || |||||| Sbjct 56983 TCAATGAATGCACCACGATCAGCAGCCATTTGAACAA--TTGTTCGTTGGGAGATTTCCC 56926 Query 105759 ACACTGTGCGGTAGAGATTCTTGATATCATCTGGGATATCTGAGATATTTTGAATTGAAC 105818 | || || ||| ||| |||||| ||| |||| |||| | |||||||||||| || | Sbjct 56925 AAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATC 56866 Query 105819 CCCCCGCCTTGACCATGAGATCCTTCATATCCTTGGACCAAAGACCAATCTTCTTGAGAT 105878 | || | | || | | |||||||| | ||||| ||||| || | || | Sbjct 56865 CACCATCAGCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGT 56806 Query 105879 CATTGACGAGATGCTTG--TTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-T 105935 | |||| || | || || || | || ||||| || || | | ||| | Sbjct 56805 CCTTGAGAAGC--CATGGATTAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGT 56749 Query 105936 AGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAG 105994 ||||||| | ||||| ||||| || ||||| || | |||||| |||| | ||| Sbjct 56748 AGATGTTTGAAGTGTAAGGTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTA 56690 Query 105995 GCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCC 106054 || || ||||| ||||| | | ||| ||| || | || | || ||||||| || | Sbjct 56689 GCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGC 56630 Query 106055 TTGAGAACATCCCAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATATCAAATTGAA 106112 || | | ||||| || | | || | ||| | ||| |||||||||| |||||| Sbjct 56629 TTCAAAGAGTCCCAATCCCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAA 56572 Query 106113 G--CACCCCTTGGGACGTGGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGC 106170 | ||||| | | ||| ||||| || | | | || || || | || | | | || Sbjct 56571 GTTCACCCTTAGAGACTGGGGAG--CCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGC 56514 Query 106171 CAATTC-ACAGCTCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCA 106229 | || || | || ||| | ||||| || ||||| || || || | || | Sbjct 56513 GATCTCGACGGAAGAGGTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGTATGTTGA 56455 Query 106230 TCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAG 106287 | |||||||| || ||||||| | || | | | || ||| |||| || || Sbjct 56454 GGTGTTTGGCTTCTGGAGAGTCAAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAG 56397 Query 106288 ACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAA 106346 |||||||||||| | | | ||||||| || || | ||| ||||| || ||| | | Sbjct 56396 ACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGA 56338 Query 106347 CGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT- 106405 | ||||| | || ||||||| | || | ||| | ||||| ||| | | Sbjct 56337 CTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAACAACAA-CTTGGACAACC 56279 Query 106406 TCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGG 106462 || ||||| |||| ||||| |||| | ||| ||||| |||| | |||| | Sbjct 56278 TCGTGAAGCTTTTGGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAA 56222 Query 106463 GCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCT 106522 ||||| || ||||| || || ||| |||||| | | |||||| | |||||| Sbjct 56221 GCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCAACGATTTCT 56162 Query 106523 GTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCAC 106582 || ||||| ||||| || ||| || |||| ||||||||||| ||||| |||||||| Sbjct 56161 GTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCAT 56102 Query 106583 GCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTC 106642 ||||||||||| |||||| |||| | || ||||| || || | || ||||| | | | Sbjct 56101 GCATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTAC 56042 Query 106643 CACACATCGGCGGC--TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTG 106699 || | | || || || | || | ||| | ||| || ||||| | Sbjct 56041 CAAAGTTTTTGAGCCTTGATAGTCTTGC---GACCCTTGCCTGCCTTTTCGTAACCCTCG 55985 Query 106700 TAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAG 106759 ||||| || || |||||||| || | || | | |||||| | || || || Sbjct 55984 TAGAGAGCCTCGAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCAC 55925 Query 106760 AAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGG 106819 | |||| ||| | ||| || ||||| ||||||||||| || || |||||||||| | Sbjct 55924 ATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAG 55865 Query 106820 GATGAAAAGAGATCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAG 106878 | | |||||||| | | || ||| | ||||| | || || || |||| ||||| Sbjct 55864 GCGTAGAAGAGATCGCGTGCA-CGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAG 55806 Query 106879 GAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACG 106938 |||||| | | |||||| |||||||||||||| || || || | | || |||| Sbjct 55805 GAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACC---AGGACG 55749 Query 106939 C------CCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAAT 106992 | ||| |||||| ||||| | || ||| ||| || || || ||||| |||| Sbjct 55748 CTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAAC 55689 Query 106993 AATACCATCTGATTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATG 107052 ||||| | || | || || || || ||| | | | || | | || Sbjct 55688 GATACCGTTAGAGTTTCCGTTGGTACCGGCAATGTATGCGCCAGTAGCACGGATTCGGTG 55629 Query 107053 GATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCC 107112 |||| | |||||||| || || ||||||||| ||||| | | | ||| | Sbjct 55628 AATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATC 55569 Query 107113 ATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGG 107172 || ||||| | || ||||||||| || ||||||||||||| || | || | Sbjct 55568 GTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGC 55509 Query 107173 TCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACA 107231 | ||| ||||| ||| |||||| ||||| | || || |||| ||| | | |||| Sbjct 55508 TTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACA 55450 Query 107232 TCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACAC 107291 || || |||||| || | || ||||| || || ||||| || || | ||| |||| Sbjct 55449 TCAAGTTGTATGTTTCGATAGCACTTTCAATATCATCACCGTGAATACCAACGGCAACAC 55390 Query 107292 GCATAAACATGTATTGGGGTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCT 107351 |||| | ||| | ||| || ||| | ||||||| || ||| |||| || Sbjct 55389 GCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAAGGTATGAAC 55330 Query 107352 TCTCAAGGGTTTTGAGACCAAAGTA 107376 ||| || ||||||| |||||||| Sbjct 55329 GCTCGAGAGTTTTGAATCCAAAGTA 55305 >seq35 Length=307329 Score = 95.1 bits (104), Expect = 1e-14 Identities = 149/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 ||||||||| || || ||||| || ||||| || |||||| || || | ||| ||||| Sbjct 74255 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACC 74196 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | |||| | ||| || |||||||||||||| || || || Sbjct 74195 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGC 74136 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAG-ACTTTGTGTCAAACCATTTCATTG 117463 || || || | ||| || | || |||| | ||| ||| | || |||||| | | Sbjct 74135 AGCGAATGCGACAAGACGTTGAGCAAAGGTG-GAGTTCTTATCTTGAATCCATTTGACAG 74077 Query 117464 CCCATTTCGCCTTCTTCTCAATACATGGTAC 117494 |||| | |||||||||| || || || || Sbjct 74076 CCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589977658352240