Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq3 154 1e-32
seq18 91.5 1e-13
>seq3
Length=2676204
Score = 154 bits (170), Expect = 1e-32
Identities = 165/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || | |||||| || | ||||| || ||||||||||||||||| || || |||
Sbjct 1949560 AGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTG 1949619
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
|||| ||||| ||||| || ||||| |||| ||| |||||||| | |||| |||||||
Sbjct 1949620 CCGTCCTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCC 1949679
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||||| ||||||| | | | | ||||||| |||||||| | |||
Sbjct 1949680 TTGTCCTGAATCTTTGATTTTACATTATCAATGGTATCTGACGATTCCACCTCTAATGTA 1949739
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| || || || |||||||| || ||||| || |||||
Sbjct 1949740 ATGGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777
>seq18
Length=865119
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608
|| || |||||||| || || ||| ||| ||||| || |||||||| || || | ||
Sbjct 543464 AGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGG 543405
Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668
| || || | ||||| ||||| || |||| ||||||||| || | |||| ||||||
Sbjct 543404 CCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCC 543345
Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728
||||| ||||| || ||| | | | || || | ||| ||||| | ||
Sbjct 543344 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTG 543285
Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766
|| ||||| ||||| | || || || || ||||||||
Sbjct 543284 ATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 543247
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380935622219598
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |