Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq3 154 1e-32 seq18 91.5 1e-13 >seq3 Length=2676204 Score = 154 bits (170), Expect = 1e-32 Identities = 165/218 (76%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || | ||||| || ||||||||||||||||| || || ||| Sbjct 1949560 AGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTG 1949619 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| ||||| ||||| || ||||| |||| ||| |||||||| | |||| ||||||| Sbjct 1949620 CCGTCCTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCC 1949679 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||||| ||||||| | | | | ||||||| |||||||| | ||| Sbjct 1949680 TTGTCCTGAATCTTTGATTTTACATTATCAATGGTATCTGACGATTCCACCTCTAATGTA 1949739 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||||||| || ||||| || ||||| Sbjct 1949740 ATGGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777 >seq18 Length=865119 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || |||||||| || || ||| ||| ||||| || |||||||| || || | || Sbjct 543464 AGACGTAACACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGG 543405 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||||| ||||| || |||| ||||||||| || | |||| |||||| Sbjct 543404 CCATCTTCGAGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCC 543345 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||||| || ||| | | | || || | ||| ||||| | || Sbjct 543344 TTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTG 543285 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || ||||| ||||| | || || || || |||||||| Sbjct 543284 ATGGTTTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 543247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380935622219598