Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq35 150 3e-31 >seq35 Length=307329 Score = 150 bits (166), Expect = 3e-31 Identities = 354/522 (68%), Gaps = 23/522 (4%) Strand=Plus/Minus Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899 ||||| || || ||||| || || |||||||| ||||| || |||| || ||||||||| Sbjct 74557 TGGTAATCACCAACTCTCTTTTCGAAGAAGTTAGTCTTGCCGGCCAAGGAAATGTTCTCC 74498 Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCAG 47958 |||||| || ||||||| | || || || |||| |||| || || Sbjct 74497 ATGAAGTCAAATGGGTTGGCAGACTTGTAGACTT-TGTCGTTACCCAAAGCGATGAGGAG 74439 Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018 |||| || ||| | |||||||||| |||||||||| ||||||||| | || | Sbjct 74438 ACGATCAGCAACGAATTCGATGTATTGCTTCATGAGGGTGGAGTTCATGCCCAAAAGAG- 74380 Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGC-ACGGCTTCCCCCACAATC 48076 ||| | || ||||| || | || || | ||| || ||| ||||| || | || Sbjct 74379 CACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCAAT-TGCGACGGCCTCGGTGATAACG 74321 Query 48077 TGCTTAACGCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCAT 48129 | ||| |||| || | || | || || |||||||| || |||| | Sbjct 74320 T-CTT------GGACGGCTT--GCTTGGATGGGC-GGTGCTTGAGATGGGAGAAGAGGAG 74271 Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || || || |||| | |||||||| ||| |||||| ||||||||||| ||| Sbjct 74270 GCATGCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAG 74211 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || | ||| | || | || ||||||||||| || | ||||| || || |||||||| Sbjct 74210 TCCGGCCATAAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAA 74151 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 |||||| || || || ||||| ||| || | | | || | | |||||| ||| Sbjct 74150 GATGCCTTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTG 74091 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351 ||||| | |||||||| ||||||||||||||||| || Sbjct 74090 AATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 74049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931527839587840