Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq35 150 3e-31
>seq35
Length=307329
Score = 150 bits (166), Expect = 3e-31
Identities = 354/522 (68%), Gaps = 23/522 (4%)
Strand=Plus/Minus
Query 47840 TGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTCC 47899
||||| || || ||||| || || |||||||| ||||| || |||| || |||||||||
Sbjct 74557 TGGTAATCACCAACTCTCTTTTCGAAGAAGTTAGTCTTGCCGGCCAAGGAAATGTTCTCC 74498
Query 47900 ATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGG-CCCATCTGTTCCAGCAG 47958
|||||| || ||||||| | || || || |||| |||| || ||
Sbjct 74497 ATGAAGTCAAATGGGTTGGCAGACTTGTAGACTT-TGTCGTTACCCAAAGCGATGAGGAG 74439
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
|||| || ||| | |||||||||| |||||||||| ||||||||| | || |
Sbjct 74438 ACGATCAGCAACGAATTCGATGTATTGCTTCATGAGGGTGGAGTTCATGCCCAAAAGAG- 74380
Query 48019 CACGGGCAA-AGCCTTTGTGAGAAACTCCTTCTCTATCTGC-ACGGCTTCCCCCACAATC 48076
||| | || ||||| || | || || | ||| || ||| ||||| || | ||
Sbjct 74379 CACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCAAT-TGCGACGGCCTCGGTGATAACG 74321
Query 48077 TGCTTAACGCGGGACT-CTGAGGGTTTGTTGCGCAGGTGCTTGGCAT------AGAGCAT 48129
| ||| |||| || | || | || || |||||||| || |||| |
Sbjct 74320 T-CTT------GGACGGCTT--GCTTGGATGGGC-GGTGCTTGAGATGGGAGAAGAGGAG 74271
Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189
||| || || || |||| | |||||||| ||| |||||| ||||||||||| |||
Sbjct 74270 GCATGCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAG 74211
Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249
|| | ||| | || | || ||||||||||| || | ||||| || || ||||||||
Sbjct 74210 TCCGGCCATAAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAA 74151
Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309
|||||| || || || ||||| ||| || | | | || | | |||||| |||
Sbjct 74150 GATGCCTTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTG 74091
Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGG 48351
||||| | |||||||| ||||||||||||||||| ||
Sbjct 74090 AATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGG 74049
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931527839587840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |