Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq35 127 4e-24
>seq35
Length=307329
Score = 127 bits (140), Expect = 4e-24
Identities = 335/512 (65%), Gaps = 9/512 (2%)
Strand=Plus/Plus
Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAGCGCTACGTTT 25872
||||||||| |||||| ||||| | || ||||| ||| | ||| | | || |||
Sbjct 74053 GCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATA-AGAACTCCACCTTT 74111
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
| | || || || || || ||||| || || |||||||| ||| ||| || || ||
Sbjct 74112 GCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGGATCCTTCGCC 74171
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
| ||||||||||||||| || || ||| |||| || ||| |||||||| |||
Sbjct 74172 TCTATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTCCAACGAACTC 74231
Query 25993 ATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTG 26052
||| | | ||||| |||||||||| ||||| || ||||| |||| | | ||| |
Sbjct 74232 ATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTC---CCATCTC 74288
Query 26053 CTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111
||| || || |||| | ||||| | | |||| ||||| || | || ||
Sbjct 74289 AAGCACCGCCCATC-CAAGCAAGCCGTCCAAGACGTTATCACCGAGGCCGTCGCAATTGA 74347
Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171
| | || || ||||||||||| || |||||
Sbjct 74348 GCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCCACCCTCAT 74407
Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231
|| |||||||| || | || || || | ||| || | |||| || || | |
Sbjct 74408 GAAGCAATACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAGT 74467
Query 26232 CTAC-AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCA 26290
|||| ||| ||| ||||| || ||||| ||||| ||||| || |||| || ||||| |
Sbjct 74468 CTACAAGTCTGCC-AACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTA 74526
Query 26291 ACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322
||||||| |||||||| || || || || |||
Sbjct 74527 ACTTCTTCGAAAAGAGAGTTGGTGATTACCAA 74558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928839853901440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |