Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq35 127 4e-24 >seq35 Length=307329 Score = 127 bits (140), Expect = 4e-24 Identities = 335/512 (65%), Gaps = 9/512 (2%) Strand=Plus/Plus Query 25814 GCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGAT-CAACAGCCAGAGCGCTACGTTT 25872 ||||||||| |||||| ||||| | || ||||| ||| | ||| | | || ||| Sbjct 74053 GCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATA-AGAACTCCACCTTT 74111 Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 | | || || || || || ||||| || || |||||||| ||| ||| || || || Sbjct 74112 GCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGGATCCTTCGCC 74171 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 | ||||||||||||||| || || ||| |||| || ||| |||||||| ||| Sbjct 74172 TCTATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTCCAACGAACTC 74231 Query 25993 ATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTG 26052 ||| | | ||||| |||||||||| ||||| || ||||| |||| | | ||| | Sbjct 74232 ATCTCCCGTGACGAAGGTCTCCACACCGATTTCGCATGCCTCCTCTTCTC---CCATCTC 74288 Query 26053 CTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGA 26111 ||| || || |||| | ||||| | | |||| ||||| || | || || Sbjct 74289 AAGCACCGCCCATC-CAAGCAAGCCGTCCAAGACGTTATCACCGAGGCCGTCGCAATTGA 74347 Query 26112 GAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCAT 26171 | | || || ||||||||||| || ||||| Sbjct 74348 GCAAGAATTCTTGACCGAGGCTCTTCCTTGTGCTCTTTTGGGCATGAACTCCACCCTCAT 74407 Query 26172 GAGCCAATACATTGAGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACT 26231 || |||||||| || | || || || | ||| || | |||| || || | | Sbjct 74408 GAAGCAATACATCGAATTCGTTGCTGATCGTCTCCTCATCGCTTTGGGTAACGACAAAGT 74467 Query 26232 CTAC-AGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCA 26290 |||| ||| ||| ||||| || ||||| ||||| ||||| || |||| || ||||| | Sbjct 74468 CTACAAGTCTGCC-AACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTA 74526 Query 26291 ACTTCTTTGAAAAGAGGGTCGGCGACTATCAA 26322 ||||||| |||||||| || || || || ||| Sbjct 74527 ACTTCTTCGAAAAGAGAGTTGGTGATTACCAA 74558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928839853901440