Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq38 105 3e-18
>seq38
Length=269250
Score = 105 bits (116), Expect = 3e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965
|||||| |||| | ||||| || ||| |||| ||| |||||||||| || || ||
Sbjct 55916 CCAATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAA 55857
Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025
| ||| | || | | ||||||||| || ||||| || |||||| | ||| |||||
Sbjct 55856 GAGATCGCGTGCACGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAA 55797
Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085
|| ||| | |||||||| || | || | |||||| ||| | || |||||
Sbjct 55796 AACATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACC 55737
Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAAC 26133
|||||| || ||||| ||||| | ||||||||| | ||| |||||
Sbjct 55736 TTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAAC 55689
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253038686247950
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |