Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq38 105 3e-18 >seq38 Length=269250 Score = 105 bits (116), Expect = 3e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||||| |||| | ||||| || ||| |||| ||| |||||||||| || || || Sbjct 55916 CCAATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAA 55857 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | ||| | || | | ||||||||| || ||||| || |||||| | ||| ||||| Sbjct 55856 GAGATCGCGTGCACGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAA 55797 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 || ||| | |||||||| || | || | |||||| ||| | || ||||| Sbjct 55796 AACATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACC 55737 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAAC 26133 |||||| || ||||| ||||| | ||||||||| | ||| ||||| Sbjct 55736 TTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAAC 55689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038686247950