Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq35 156 5e-33
>seq35
Length=307329
Score = 156 bits (172), Expect = 5e-33
Identities = 192/258 (74%), Gaps = 6/258 (2%)
Strand=Plus/Plus
Query 138162 AATGGTGTGAGATGT--TTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCAT 138219
||||||| ||||| |||| |||||||| ||||| ||||||||||| ||||||||||
Sbjct 110354 AATGGTGCCAGATGAGATTTG--ACACCAATTGGACCAACGCCAGGACCACCACCTCCAT 110411
Query 138220 GTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279
| ||||||||||||||||| || | ||| ||||| |||||||| |||||| |||| |
Sbjct 110412 GAGGAATACAGAATGTCTTGTGAAGATTAAGATGGCATACATCGGCACCAATTTCACCAG 110471
Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339
|| || || | ||| ||||| | || || || || | |||||| ||||||||||
Sbjct 110472 GTGAACATAATCCGATCTGAGCATTCATGTTGGCGCCGTCCATATATACTTGACCACCAT 110531
Query 138340 TGTCATGAACGATCTTACATATCTGTC-TGATGTTTGTTTCAAATACACCATGAGTCGAT 138398
| |||||| || | |||| | | | |||| | || ||| || || ||| || |
Sbjct 110532 GCTGATGAACAATATCACAT-GCAGCCTTGATCTCTGGTTCGAACACTCCAAATGTACTT 110590
Query 138399 GGATATGTAATCATAATA 138416
|| ||||| |||||||||
Sbjct 110591 GGGTATGTGATCATAATA 110608
Score = 105 bits (116), Expect = 8e-18
Identities = 192/281 (68%), Gaps = 0/281 (0%)
Strand=Plus/Plus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
||||| |||| ||||| || ||||||||||| || ||| || || | | ||| ||
Sbjct 111527 AGTCCTTCTGGTCCATGGTAGACTGCATAGAATGCACTCATGTTGGCCAATAATGCCTGA 111586
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|| ||||| | ||||| || || || |||| | |||||||| ||||||||||| |
Sbjct 111587 GCCGTGCACACATTACTAGTAGCCTTTTCTCGGCGGATATGCTGTTCTCTAGTTTGCAAA 111646
Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439
|| ||||| ||| || ||| || ||| || ||| | | | || ||
Sbjct 111647 GCCAATCTCATTGCTTTATCACCTAGTCTATCCTTCGATACACCAATGAGACGTCCTGGA 111706
Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499
||||||||||| || ||||| | || ||||| |||||||| ||||| || || ||
Sbjct 111707 ATCTTTCTCTTGTATTTGTCGCTAACAGCGAAGAAAGCAGCATGTGGACCACCATAACCA 111766
Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540
| |||| ||||| | ||| | | || | |||||||||
Sbjct 111767 AATGGAACTCCAAAACGTTGAGCATTTCCAAAAGCAATATC 111807
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578995316833520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |