Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq35 156 5e-33 >seq35 Length=307329 Score = 156 bits (172), Expect = 5e-33 Identities = 192/258 (74%), Gaps = 6/258 (2%) Strand=Plus/Plus Query 138162 AATGGTGTGAGATGT--TTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCAT 138219 ||||||| ||||| |||| |||||||| ||||| ||||||||||| |||||||||| Sbjct 110354 AATGGTGCCAGATGAGATTTG--ACACCAATTGGACCAACGCCAGGACCACCACCTCCAT 110411 Query 138220 GTGGAATACAGAATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATG 138279 | ||||||||||||||||| || | ||| ||||| |||||||| |||||| |||| | Sbjct 110412 GAGGAATACAGAATGTCTTGTGAAGATTAAGATGGCATACATCGGCACCAATTTCACCAG 110471 Query 138280 GTTTTGCTAGACCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCAT 138339 || || || | ||| ||||| | || || || || | |||||| |||||||||| Sbjct 110472 GTGAACATAATCCGATCTGAGCATTCATGTTGGCGCCGTCCATATATACTTGACCACCAT 110531 Query 138340 TGTCATGAACGATCTTACATATCTGTC-TGATGTTTGTTTCAAATACACCATGAGTCGAT 138398 | |||||| || | |||| | | | |||| | || ||| || || ||| || | Sbjct 110532 GCTGATGAACAATATCACAT-GCAGCCTTGATCTCTGGTTCGAACACTCCAAATGTACTT 110590 Query 138399 GGATATGTAATCATAATA 138416 || ||||| ||||||||| Sbjct 110591 GGGTATGTGATCATAATA 110608 Score = 105 bits (116), Expect = 8e-18 Identities = 192/281 (68%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| |||| ||||| || ||||||||||| || ||| || || | | ||| || Sbjct 111527 AGTCCTTCTGGTCCATGGTAGACTGCATAGAATGCACTCATGTTGGCCAATAATGCCTGA 111586 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||| | ||||| || || || |||| | |||||||| ||||||||||| | Sbjct 111587 GCCGTGCACACATTACTAGTAGCCTTTTCTCGGCGGATATGCTGTTCTCTAGTTTGCAAA 111646 Query 139380 GCTAATCTGTATGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGGT 139439 || ||||| ||| || ||| || ||| || ||| | | | || || Sbjct 111647 GCCAATCTCATTGCTTTATCACCTAGTCTATCCTTCGATACACCAATGAGACGTCCTGGA 111706 Query 139440 ATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCCC 139499 ||||||||||| || ||||| | || ||||| |||||||| ||||| || || || Sbjct 111707 ATCTTTCTCTTGTATTTGTCGCTAACAGCGAAGAAAGCAGCATGTGGACCACCATAACCA 111766 Query 139500 ATAGGAATACCAAACCTTTGCATACTACCTACAGCAATATC 139540 | |||| ||||| | ||| | | || | ||||||||| Sbjct 111767 AATGGAACTCCAAAACGTTGAGCATTTCCAAAAGCAATATC 111807 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578995316833520