Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq38 264 1e-65
seq35 95.1 1e-14
>seq38
Length=269250
Score = 264 bits (292), Expect = 1e-65
Identities = 1174/1816 (65%), Gaps = 65/1816 (4%)
Strand=Plus/Plus
Query 75146 TACTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGGCTCGATGGCATCCTCATG 75205
|||||||| ||||||| || ||| || |||| ||| || ||||||| |
Sbjct 55305 TACTTTGGATTCAAAACTCTCGAGCGTTCATACCTTCTACGTCTTGATGGCAAAGTTGCA 55364
Query 75206 GAAACCCCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGAT 75265
||| ||||| | ||| ||||||| || || | || || ||||| || || |||||
Sbjct 55365 GAACGTCCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATTGAA 55424
Query 75266 TCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAAC 75324
|| | || |||||| || |||||| | | ||| |||| || || | |||||
Sbjct 55425 AGTGCTATCGAAACATACAACTTGATGTCAAACAAGTAC-TTCACACATGCCTCGCCAAC 55483
Query 75325 CCTCTTCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAA 75384
|||||| ||| ||||| ||| | | || | || ||||||||||||| || ||
Sbjct 55484 ACTCTTCTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAA 55543
Query 75385 GGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTG 75444
||||||| || | ||||| || | ||| | | | ||||| |||||||||
Sbjct 55544 GGAGGACAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAA 55603
Query 75445 GGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGG 75504
|| || |||||||| | |||| || | | || | | | ||| ||
Sbjct 55604 TGCCGGTGGTATTGGTCTCAACATTCACCGAATCCGTGCTACTGGCGCATACATTGCCGG 55663
Query 75505 GACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCG 75564
|| || || | || | ||||| |||| ||||| || || || ||| ||| || |
Sbjct 55664 TACCAACGGAAACTCTAACGGTATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAG 55723
Query 75565 CTATGTAAATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACC 75618
||||| |||||| || ||||| || || | || || ||| | || ||
Sbjct 55724 ATATGTTGATCAAGGTGGTAATAAGCGTCCT---GGTGCCTTTGCTGTTTACCTTGAGCC 55780
Query 75619 ATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGC 75678
||||||||| ||| | | ||||||||||| |||| || || || | ||||| |
Sbjct 55781 ATGGCATGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAAGAAGAAGT 55840
Query 75679 TCGGTGTA-GAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTG 75737
||| || | | |||||||| | || |||||||||| || || ||||||||||| ||||
Sbjct 55841 TCG-TGCACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTG 55899
Query 75738 AGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGG 75797
| || ||| | ||| |||| | || || || | |||||| | | || |
Sbjct 55900 AAAAGAATGGGGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTT 55959
Query 75798 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGG-AGGGTAGAGCCAATGC- 75855
|| |||||||| || || |||||| || ||| ||| ||| || | | ||
Sbjct 55960 ATGGCGAGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTC---GCA 56016
Query 75856 -GACTGTACCAGCCGCCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
|||| | | || | | | ||||| | | ||||| | | || || ||||| |||
Sbjct 56017 AGACTAT-CAAGGCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGA 56075
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
| || | ||||||||||||||||| || ||||||||||| ||||||||||| ||||
Sbjct 56076 AATCCCTTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGT 56135
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
|| || ||||| ||| | ||||| ||||| | |||||| | | ||||||
Sbjct 56136 ACTATTCGCAGCTCCAATTTGTGCACAGAAATCGTTGAGTACTCTGCACCAGATGAGGTT 56195
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCA--ATGAA-GAGACTCGC 76090
||| || || ||||| || ||||| | |||| | |||| ||||| ||| |
Sbjct 56196 GCTTGCTGTAACTTGGCTTCCATCGCTTTACCAACTTTCGTCAACATGAATGAG---GGA 56252
Query 76091 ACTTTTGATTATGAAAAACTTCATGA-AATCACAAAGATTGTTACCAAAAATCTAAACCG 76149
|||| ||||| |||| ||||| || | | ||| ||||| | ||| | ||
Sbjct 56253 ACTTATGATTTCCAAAAGCTTCACGAGGTTGTCCAAG-TTGTTGTTAGAAACTTGAATAA 56311
Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTG-AGACTGCGCGAAAGTCTAATATGCGACACA 76208
| ||||||| || | ||||| || | ||| || ||||| ||| | || ||
Sbjct 56312 GATTATTGACATCAACTACTATCCAGTCGCAGA-GGCCCGAAAAAGCAATTTCCGTCATC 56370
Query 76209 GACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATT--TTGTGCCGCTACGC 76266
||||||| | | | |||||||||||||| || |||| ||| || | | | || | |
Sbjct 56371 GACCTATCGCTGTTGGTGTTCAAGGTCTTGCTGATG-CTTTCTTGGCTCTTCGTCTTC-C 56428
Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326
|||||| || |||||||| | | || | || || || ||||| || |||||
Sbjct 56429 ATTTGACTCTCCAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGC 56488
Query 76327 ATCCCTGGAGGCGAGTT--GT-GAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGA 76383
| ||| || | || || || | || | | | || | || || || | | |
Sbjct 56489 -TGCCTTGA--CCTCTTCCGTCGAGATCGCAAAGGAACTTGGCCCATACGAAACCTATCA 56545
Query 76384 GGGTTCTCCCGCGTCCCAAGGGGTG--CTTCAGTTTGATATGTGGGAAGGTGAAACCAAG 76441
|| ||||| ||| | | ||||| ||||| | |||||||||| ||| | ||| |
Sbjct 56546 AGG--CTCCCCAGTCTCTAAGGGTGAACTTCAATACGATATGTGGG-GGGTTACACCTA- 56601
Query 76442 CTCA--ACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACA 76499
|| | | || ||||| | | ||| || ||||||| | | || | || |||
Sbjct 56602 CTGATTTGTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACT 56661
Query 76500 GTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAA 76558
||| | | ||||| ||||| || || ||| | |||| |||||| | || |||
Sbjct 56662 CTCTCCTAGTTGCACCTATGCCTACTGCTAGCACATCCCAAATTCTTGGCT-TCAACGAA 56720
Query 76559 TGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTC 76618
|| || ||||| ||||| ||||||||||| | | || || || || ||
Sbjct 56721 TGTTTCGAACCTTACACTTCAAACATCTACTCTCGTCGTGTTCTTGCCGGAGAATTCCAA 56780
Query 76619 ATTGTCAA-CAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATAT 76677
| || || | | | || |||| ||||| | || ||||||||||| | ||||
Sbjct 56781 GTCGTTAATCCATGGCTTC-TCAAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATAT 56839
Query 76678 GAAGGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAG 76733
|||| | | ||| || ||| ||||| ||||||||||||||| | |||| ||||
Sbjct 56840 GAAGAACCGTATCATTGCTGA----TGGTGGATCCATTCAAAATATCCCCAATATTCCAG 56895
Query 76734 ATGATATCAAGAATCTCTACCGCACAGTGTGGGAAA--TCAAGATGAAAGATGTCATTGA 76791
||| |||||| ||| ||| || || ||||||| || | ||| | | || |
Sbjct 56896 CTGACATCAAGGCTCTTTACAAGACTGTTTGGGAAATCTCCCAACGAACAA--TTGTTCA 56953
Query 76792 CATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCATGGA 76851
||||| || ||||||||| |||||||||||| |||| ||||| | |||| |
Sbjct 56954 AATGGCTGCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATTCACATGAA 57013
Query 76852 AAGTCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAA 76911
||| || ||| |||| | | || |||||| | | |||||| ||| | ||
Sbjct 57014 GGATCCTACAATGGGCAAGATTACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAA 57073
Query 76912 AACCGGAATGTACTAT 76927
|||||||||||||||
Sbjct 57074 GACCGGAATGTACTAT 57089
>seq35
Length=307329
Score = 95.1 bits (104), Expect = 1e-14
Identities = 149/211 (71%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 65008 GTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGGTTTGACACAAAGT-CTCG 65066
|| || || || |||||||||| | ||||| | |||||| || | ||| |||
Sbjct 74046 GTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTC- 74104
Query 65067 CTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTC 65126
| |||| || | || ||| | || || || || || || |||||||||||||| ||
Sbjct 74105 CACCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGGATC 74164
Query 65127 ATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAA 65186
||| | |||| | ||| | |||||||| ||||| ||| | || || |||||| ||
Sbjct 74165 CTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTCCAA 74224
Query 65187 TGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217
||||| || ||||| || || |||||||||
Sbjct 74225 CGAACTCATCTCCCGTGACGAAGGTCTCCAC 74255
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596566423266880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |