Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq3 100 4e-16
>seq3
Length=2676204
Score = 100 bits (110), Expect = 4e-16
Identities = 137/190 (72%), Gaps = 1/190 (1%)
Strand=Plus/Minus
Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882
|||||||| ||| | || || |||||||| || || ||||||||||| || ||| ||
Sbjct 1949777 ATGCAAATCTTTGTCAAGACTTTGACTGGCAAGACCATTACATTAGAGGTGGAATCGTCA 1949718
Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942
|||| ||| || || ||| || || || || || || ||||| || || || |||
Sbjct 1949717 GATACCATTGATAATGTAAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 1949658
Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002
||| ||||||| | ||| || ||||| | || || |||||| | || ||||| |||
Sbjct 1949657 CAACGATTGATCTTTGCAGGAAAGCAATTGGAGGACGGCAGAACCCTTTCGGATTACAAT 1949598
Query 156003 ATATCCAAAG 156012
|| || ||||
Sbjct 1949597 AT-TCAAAAG 1949589
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731868102781600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |