Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq3 134 3e-26
>seq3
Length=2676204
Score = 134 bits (148), Expect = 3e-26
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Plus
Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT--CTTTAGAGATATTATAATCA 192366
|||||| | |||||| | || || || || || || | |||| || ||||| |||||
Sbjct 1949550 ACCACCACGAAGACGGAGCACCAAGTGCAAGGT-GCTTTCCTTTTGA-ATATTGTAATCC 1949607
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||| | || |||||||| || || |||||||| |||| ||||||||||||
Sbjct 1949608 GAAAGGGTTCTGCCGTCCTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGT 1949667
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || || || || || || || |||||||||| || | ||||||||||||
Sbjct 1949668 GGAATGCCCTCCTTGTCCTGAATCTTTGATTTTACATTATCAATGGTATCTGACGATTCC 1949727
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| |||| |||||||| || ||||| || || || | ||| || |||||
Sbjct 1949728 ACCTCTAATGTAATGGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777
Score = 107 bits (118), Expect = 4e-18
Identities = 164/231 (71%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCT-CTTTAGAGATATTATAATC 192365
|||||||| | ||||| | || ||||||||||| | | |||| || || || |||||
Sbjct 1949776 ATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGA-ATGTTGTAATC 1949834
Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425
|| | ||| || |||| || | ||| |||||||||||||| | | |||||||| ||
Sbjct 1949835 CGAAAGTGTACGACCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGATCGGG 1949894
Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485
||| || || || |||||||| || || || ||||| || | ||| || |||||
Sbjct 1949895 TGGGATACCCTCCTTATCTTGGATCTTTGACTTCACATTGTCGATGGTATCCGATGATTC 1949954
Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|| || | ||| || || || || || | || || | || ||||||||
Sbjct 1949955 AACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 1950005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984474626585100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |