Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq3 116 5e-20
seq35 102 1e-15
>seq3
Length=2676204
Score = 116 bits (128), Expect = 5e-20
Identities = 91/109 (83%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245
|| |||||||| || ||||||||| | || || ||| |||| |||||| | || ||||||
Sbjct 1392919 GCTGCCAACTATCTTGACATCAAGGCCCTCCTTGATGTTGGATGCAAGACCGTTGCCAAC 1392860
Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294
||||||||||| ||||| || |||||||| ||||| ||||| |||||||
Sbjct 1392859 ATGATCAAGGGAAAGTCCCCAGAGGAGATTCGCAAAACCTTCAACATCA 1392811
>seq35
Length=307329
Score = 102 bits (112), Expect = 1e-15
Identities = 141/194 (73%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238
||||||||| || ||| | ||||||| |||| ||| |||| ||| || || |||||
Sbjct 74249 ACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACCACGCTT 74190
Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298
||||||||| ||||| | | ||| || ||||| |||||||| || ||||| || ||
Sbjct 74189 CTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGCAGCGAA 74130
Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357
||| || || | ||||||||| ||| | | |||| ||||| || | ||||
Sbjct 74129 TGCGACAAGACGTTGAGCAAAGGTG--GAGTTCTTATCTTG--AATCCATTTGACAGCCC 74074
Query 869358 AGTCGGCCTTTTTC 869371
|||||||||| |||
Sbjct 74073 AGTCGGCCTTCTTC 74060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107104240445042
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |