Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 116 5e-20 seq35 102 1e-15 >seq3 Length=2676204 Score = 116 bits (128), Expect = 5e-20 Identities = 91/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 || |||||||| || ||||||||| | || || ||| |||| |||||| | || |||||| Sbjct 1392919 GCTGCCAACTATCTTGACATCAAGGCCCTCCTTGATGTTGGATGCAAGACCGTTGCCAAC 1392860 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCA 1592294 ||||||||||| ||||| || |||||||| ||||| ||||| ||||||| Sbjct 1392859 ATGATCAAGGGAAAGTCCCCAGAGGAGATTCGCAAAACCTTCAACATCA 1392811 >seq35 Length=307329 Score = 102 bits (112), Expect = 1e-15 Identities = 141/194 (73%), Gaps = 5/194 (3%) Strand=Plus/Minus Query 869179 ACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTT 869238 ||||||||| || ||| | ||||||| |||| ||| |||| ||| || || ||||| Sbjct 74249 ACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACCACGCTT 74190 Query 869239 CTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 869298 ||||||||| ||||| | | ||| || ||||| |||||||| || ||||| || || Sbjct 74189 CTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGCAGCGAA 74130 Query 869299 GCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCT-CCTTGTTGATCCACTTCATCGCCC 869357 ||| || || | ||||||||| ||| | | |||| ||||| || | |||| Sbjct 74129 TGCGACAAGACGTTGAGCAAAGGTG--GAGTTCTTATCTTG--AATCCATTTGACAGCCC 74074 Query 869358 AGTCGGCCTTTTTC 869371 |||||||||| ||| Sbjct 74073 AGTCGGCCTTCTTC 74060 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107104240445042