Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq18 129 4e-25
seq3 105 4e-18
seq17 91.5 1e-13
>seq18
Length=865119
Score = 129 bits (142), Expect = 4e-25
Identities = 159/215 (74%), Gaps = 8/215 (4%)
Strand=Plus/Minus
Query 34769 ACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCC 34828
|||| ||||| ||| |||||| || ||||| || || || ||| |||| |||| ||
Sbjct 543455 ACCAAGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCGGAAAGGGTGCGGCCATCTTCG 543396
Query 34829 AGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTT 34888
|||||||||||||||||||||| ||| || ||||| | || | ||||||||||| |
Sbjct 543395 AGTTGCTTTCCGGCGAAGATCAATCGCTGTTGGTCGGGTGGAATTCCCTCCTTGTCCTGG 543336
Query 34889 ATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGT 34944
|| || ||||| || | ||||| || | ||| || || | ||| |||||
Sbjct 543335 ATCTTGGACTTGAC--AT--TGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGT 543280
Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATGA 34979
|| |||||||||||||| || |||||||||||||
Sbjct 543279 TTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGA 543245
>seq3
Length=2676204
Score = 105 bits (116), Expect = 4e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 34763 CTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCA 34822
|| ||||||| ||||| ||| ||||||||| || ||||| || || ||| |||| |
Sbjct 1950019 CTGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATATTATAATCGGAAAGGGTGCGACCG 1950078
Query 34823 TCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34882
|| |||||||||||||| ||||| |||| ||||| ||||| | || | || ||||||
Sbjct 1950079 TCTTCCAGTTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCGGGAGGAATGCCTTCCTTG 1950138
Query 34883 TCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATG 34942
|| | || || || ||| | || | || | ||||| |||| ||| |||
Sbjct 1950139 TCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATG 1950198
Query 34943 GTCTTTCCCGTGAGGGTCTTTAC 34965
|||||||| || || ||||| ||
Sbjct 1950199 GTCTTTCCGGTAAGAGTCTTAAC 1950221
Score = 95.1 bits (104), Expect = 8e-15
Identities = 152/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
|| |||| ||| | |||||| ||||| ||||| || || ||||| ||| | | | ||
Sbjct 1949566 AGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCC 1949625
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|||| ||||||||| || ||||||| |||||| || || | || | |||||||||||
Sbjct 1949626 TCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCC 1949685
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941
| || ||| ||| || || |||| || || | || || || | || ||
Sbjct 1949686 TGAATCTTTGATTTTAC--AT--TATCAATGGTATCTGACGATTCCACCTCTAATGTAAT 1949741
Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|||||| || || | ||||| |||||||| |||||
Sbjct 1949742 GGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777
Score = 84.2 bits (92), Expect = 1e-11
Identities = 136/196 (69%), Gaps = 10/196 (5%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||| |||||||| || ||||| || | || |||| || |||||||| || || |||
Sbjct 1949815 TCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCATCCTCAAGTTGCTTACCAGCAAAG 1949874
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACG--- 34903
|| || ||||| || || | || | |||||||| || | || ||| || ||
Sbjct 1949875 ATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTCACATTG 1949934
Query 34904 --GATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961
|||| |||| | ||| | || || | || || |||||||| || |||||||
Sbjct 1949935 TCGATGGTATCCGATGATT-----CAACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCT 1949989
Query 34962 TTACAAAGATCTGCAT 34977
| || |||||||||||
Sbjct 1949990 TGACGAAGATCTGCAT 1950005
>seq17
Length=875485
Score = 91.5 bits (100), Expect = 1e-13
Identities = 133/186 (72%), Gaps = 8/186 (4%)
Strand=Plus/Minus
Query 34788 CCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGA 34847
|||| || ||||| || || || || | || | || |||| ||||||||| |||||||
Sbjct 658245 CCTTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGA 658186
Query 34848 TCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATG 34907
||| ||||| || || | || | ||||||||||| | || || ||||| ||
Sbjct 658185 TCAAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGAC--AT- 658129
Query 34908 CTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| ||||| || || |||||| |||| ||| |||||||| ||||| ||||||||
Sbjct 658128 -TGTCGATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTG 658070
Query 34964 ACAAAG 34969
|| |||
Sbjct 658069 ACGAAG 658064
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325691109043694
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |