Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_023426.1
Length=245717
Score E
Sequences producing significant alignments: (Bits) Value
seq3 95.1 2e-14
>seq3
Length=2676204
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/209 (71%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
|||| || ||| | || || | || ||||| ||||| ||| | || || ||| |||
Sbjct 1950004 TGCAGATCTTCGTCAAGACCCTTACCGGAAAGACAATCACTTTGGAGGTTGAATCATCG- 1949946
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||| || | ||||| || || || ||| ||| || || || ||||||||||||
Sbjct 1949945 GATACCATCGACAATGTGAAGTCAAAGATCCAAGATAAGGAGGGTATCCCACCCGATCAA 1949886
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
||| | || || ||||| ||||| ||| | || ||| | | || | | ||||| ||
Sbjct 1949885 CAACGTCTTATCTTTGCTGGTAAGCAACTTGAGGATGGTCGTACACTTTCGGATTACAAC 1949826
Query 146211 ATACAAAAAGAATCGACTATCCATTTAGT 146239
|| ||||| ||||||||| | ||||| ||
Sbjct 1949825 ATTCAAAAGGAATCGACTTTACATTTGGT 1949797
Score = 91.5 bits (100), Expect = 2e-13
Identities = 137/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090
||||||| || | || || || || || || || ||||| | || || ||| | | |
Sbjct 1949776 TGCAAATCTTTGTCAAGACTTTGACTGGCAAGACCATTACATTAGAGGTGGAATCGTCA- 1949718
Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150
||||| ||| | ||||||||| || || || || || ||||||||||| ||||||
Sbjct 1949717 GATACCATTGATAATGTAAAATCAAAGATTCAGGACAAGGAGGGCATTCCACCTGATCAA 1949658
Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210
||| || | || |||||||| || ||||| || || ||||| | | ||||| |||
Sbjct 1949657 CAACGATTGATCTTTGCAGGAAAGCAATTGGAGGACGGCAGAACCCTTTCGGATTACAAT 1949598
Query 146211 ATACAAAAAGAA 146222
|| ||||| |||
Sbjct 1949597 ATTCAAAAGGAA 1949586
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 786162213663920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |