Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq3 95.1 1e-14
>seq3
Length=2676204
Score = 95.1 bits (104), Expect = 1e-14
Identities = 128/176 (73%), Gaps = 2/176 (1%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||||||||| || ||||| || | || ||| ||| | || || || || || ||
Sbjct 1950320 GTAGACTCTTTCTGGATGTTGTAGTCACTCAAGGTGCGACCA-TCTTCAAGTTGTTTTCC 1950378
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582
||| |||| | ||||| ||||||||||| || || |||||||| |||||| |||
Sbjct 1950379 GGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTT 1950438
Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638
|| | || | |||||| ||| ||| || |||| ||| | || || |||||||
Sbjct 1950439 GACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATAGTCTTACCGGTCA 1950494
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/197 (71%), Gaps = 2/197 (1%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
|| || | ||| ||||| ||||| ||||| |||||| | ||| ||| ||| || ||
Sbjct 1950028 AAGTGAAGGGTAGACTCCTTCTGGATATTATAATCGGAAAGGGTGCGACC-GTCTTCCAG 1950086
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
||||| || ||| |||| | || || ||||||||||| |||||||||||||| ||
Sbjct 1950087 TTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAAT 1950146
Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633
||| ||| | | || | ||||| | | || || || | ||||| ||| || ||
Sbjct 1950147 CTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCC 1950206
Query 133634 GGTCAGAGTTTTTACGA 133650
||| ||||| || ||||
Sbjct 1950207 GGTAAGAGTCTTAACGA 1950223
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483418225784240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |