Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=2676204 Score = 95.1 bits (104), Expect = 1e-14 Identities = 128/176 (73%), Gaps = 2/176 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||||||||| || ||||| || | || ||| ||| | || || || || || || Sbjct 1950320 GTAGACTCTTTCTGGATGTTGTAGTCACTCAAGGTGCGACCA-TCTTCAAGTTGTTTTCC 1950378 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | ||||| ||||||||||| || || |||||||| |||||| ||| Sbjct 1950379 GGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTT 1950438 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCA 133638 || | || | |||||| ||| ||| || |||| ||| | || || ||||||| Sbjct 1950439 GACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATAGTCTTACCGGTCA 1950494 Score = 91.5 bits (100), Expect = 1e-13 Identities = 140/197 (71%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||| ||||| ||||| ||||| |||||| | ||| ||| ||| || || Sbjct 1950028 AAGTGAAGGGTAGACTCCTTCTGGATATTATAATCGGAAAGGGTGCGACC-GTCTTCCAG 1950086 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||| || ||| |||| | || || ||||||||||| |||||||||||||| || Sbjct 1950087 TTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAAT 1950146 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 ||| ||| | | || | ||||| | | || || || | ||||| ||| || || Sbjct 1950147 CTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCC 1950206 Query 133634 GGTCAGAGTTTTTACGA 133650 ||| ||||| || |||| Sbjct 1950207 GGTAAGAGTCTTAACGA 1950223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483418225784240