Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq35 93.3 6e-13
>seq35
Length=307329
Score = 93.3 bits (102), Expect = 6e-13
Identities = 140/198 (71%), Gaps = 1/198 (1%)
Strand=Plus/Plus
Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929
|| |||||||| | |||||| ||||| ||||| || || |||||| || || ||
Sbjct 73758 GATGACGAGCGTTACTTCATCTCCCACGTTCTCGCATTCTT-CGCCGCATCAGACGGAAT 73816
Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989
|| ||||||| ||| | || || | || || || | ||||||||||| |
Sbjct 73817 TGTCAACGAGAACTTGGTTGAGCGATTCAGTGGTGAAGTTCAGATCCCAGAGGCACGATG 73876
Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049
|| ||||| ||||| ||| || || ||||| ||||| ||||| ||||| || || ||
Sbjct 73877 CTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCCGAAACATACTCTCTTCTCAT 73936
Query 1456050 CGACACCTACGTCAAGGA 1456067
|||||| || |||||||
Sbjct 73937 CGACACATATATCAAGGA 73954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177770111517012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |