Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq35 93.3 6e-13 >seq35 Length=307329 Score = 93.3 bits (102), Expect = 6e-13 Identities = 140/198 (71%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 1455870 GACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCAT 1455929 || |||||||| | |||||| ||||| ||||| || || |||||| || || || Sbjct 73758 GATGACGAGCGTTACTTCATCTCCCACGTTCTCGCATTCTT-CGCCGCATCAGACGGAAT 73816 Query 1455930 CGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTT 1455989 || ||||||| ||| | || || | || || || | ||||||||||| | Sbjct 73817 TGTCAACGAGAACTTGGTTGAGCGATTCAGTGGTGAAGTTCAGATCCCAGAGGCACGATG 73876 Query 1455990 GTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGAT 1456049 || ||||| ||||| ||| || || ||||| ||||| ||||| ||||| || || || Sbjct 73877 CTTCTACGGTTTCCAAATCATGATGGAGAACATTCACTCCGAAACATACTCTCTTCTCAT 73936 Query 1456050 CGACACCTACGTCAAGGA 1456067 |||||| || ||||||| Sbjct 73937 CGACACATATATCAAGGA 73954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177770111517012