Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3 111 2e-19
>seq3
Length=2676204
Score = 111 bits (122), Expect = 2e-19
Identities = 141/194 (73%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || ||||| || || || || ||| || |||| || ||| || || ||
Sbjct 1950030 GTGAAGGGTAGACTCCTTCTGGATATTATAATCGGAAAGGGTGCGACCGTCTTCCAGTTG 1950089
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
|| || || ||||||||||| || || ||||| || |||||||| || |||||||| ||
Sbjct 1950090 CTTTCCAGCGAAAATCAAACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 1950149
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
|| || ||| | ||||| || ||||| || || || || ||||| || |||||
Sbjct 1950150 AGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 1950209
Query 134690 TAAAGTTTTAACGA 134703
| ||| |||||||
Sbjct 1950210 AAGAGTCTTAACGA 1950223
Score = 105 bits (116), Expect = 7e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| || | ||| | ||| | ||| |||||||||||| ||||| || || |||
Sbjct 1949560 AGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTG 1949619
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
||| || | || || |||||||| ||||| || || ||||| || || ||||| ||
Sbjct 1949620 CCGTCCTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCC 1949679
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || ||||| ||| ||| || || | || || ||||||||||| || | |||
Sbjct 1949680 TTGTCCTGAATCTTTGATTTTACATTATCAATGGTATCTGACGATTCCACCTCTAATGTA 1949739
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || ||||| || || || ||||||||
Sbjct 1949740 ATGGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777
Score = 95.1 bits (104), Expect = 1e-14
Identities = 129/180 (72%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569
||| || || || || || || ||||||||||| | | |||| || || || || ||
Sbjct 1950313 GTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCAAGTTG 1950372
Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629
||| || || |||||||||||||| || ||||| || || || || || || || || ||
Sbjct 1950373 TTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTT 1950432
Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689
||||| ||| | |||||| || || || ||||| ||||| || ||||||||
Sbjct 1950433 GGACTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATAGTCTTACCGGT 1950492
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570
|||| || |||||||||||||||||||| || || || || || || || ||
Sbjct 1949803 TGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCATCCTCAAGTTGC 1949862
Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630
|| || ||||| || | ||| || |||||||| || || || || || ||||| || |||
Sbjct 1949863 TTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTT 1949922
Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690
|| || ||| | || || || ||||| || || | ||| || || || |||||
Sbjct 1949923 GACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTCTTTCCGGTA 1949982
Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713
| || || ||||| || |||||
Sbjct 1949983 AGGGTCTTGACGAAGATCTGCAT 1950005
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505395708753520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |