Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3 111 2e-19 >seq3 Length=2676204 Score = 111 bits (122), Expect = 2e-19 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || ||||| || || || || ||| || |||| || ||| || || || Sbjct 1950030 GTGAAGGGTAGACTCCTTCTGGATATTATAATCGGAAAGGGTGCGACCGTCTTCCAGTTG 1950089 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 || || || ||||||||||| || || ||||| || |||||||| || |||||||| || Sbjct 1950090 CTTTCCAGCGAAAATCAAACGTTGTTGGTCGGGAGGAATGCCTTCCTTGTCTTGAATCTT 1950149 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 || || ||| | ||||| || ||||| || || || || ||||| || ||||| Sbjct 1950150 AGACTTAACGTTGTCGATGGTGTCTGAAGATTCGACCTCAAGGGTGATGGTCTTTCCGGT 1950209 Query 134690 TAAAGTTTTAACGA 134703 | ||| ||||||| Sbjct 1950210 AAGAGTCTTAACGA 1950223 Score = 105 bits (116), Expect = 7e-18 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| | ||| |||||||||||| ||||| || || ||| Sbjct 1949560 AGACGGAGCACCAAGTGCAAGGTGCTTTCCTTTTGAATATTGTAATCCGAAAGGGTTCTG 1949619 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 ||| || | || || |||||||| ||||| || || ||||| || || ||||| || Sbjct 1949620 CCGTCCTCCAATTGCTTTCCTGCAAAGATCAATCGTTGTTGATCAGGTGGAATGCCCTCC 1949679 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675 || || ||||| ||| ||| || || | || || ||||||||||| || | ||| Sbjct 1949680 TTGTCCTGAATCTTTGATTTTACATTATCAATGGTATCTGACGATTCCACCTCTAATGTA 1949739 Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| || || || |||||||| Sbjct 1949740 ATGGTCTTGCCAGTCAAAGTCTTGACAAAGATTTGCAT 1949777 Score = 95.1 bits (104), Expect = 1e-14 Identities = 129/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 134510 GTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTG 134569 ||| || || || || || || ||||||||||| | | |||| || || || || || Sbjct 1950313 GTGGAGAGTAGACTCTTTCTGGATGTTGTAGTCACTCAAGGTGCGACCATCTTCAAGTTG 1950372 Query 134570 TTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTT 134629 ||| || || |||||||||||||| || ||||| || || || || || || || || || Sbjct 1950373 TTTTCCGGCGAAAATCAAACGCTGTTGGTCGGGAGGAATTCCCTCCTTGTCCTGGATCTT 1950432 Query 134630 TTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGT 134689 ||||| ||| | |||||| || || || ||||| ||||| || |||||||| Sbjct 1950433 GGACTTGACATTGTCGATGGTGTCGCTGGACTCAACCTCGAGGGTAATAGTCTTACCGGT 1950492 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 |||| || |||||||||||||||||||| || || || || || || || || Sbjct 1949803 TGTAAAGTCGATTCCTTTTGAATGTTGTAATCCGAAAGTGTACGACCATCCTCAAGTTGC 1949862 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || ||||| || | ||| || |||||||| || || || || || ||||| || ||| Sbjct 1949863 TTACCAGCAAAGATAAGACGTTGTTGATCGGGTGGGATACCCTCCTTATCTTGGATCTTT 1949922 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 || || ||| | || || || ||||| || || | ||| || || || ||||| Sbjct 1949923 GACTTCACATTGTCGATGGTATCCGATGATTCAACCTCCAAAGTGATTGTCTTTCCGGTA 1949982 Query 134691 AAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| || ||||| Sbjct 1949983 AGGGTCTTGACGAAGATCTGCAT 1950005 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505395708753520