Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1 102 6e-17 >seq1 Length=3942387 Score = 102 bits (112), Expect = 6e-17 Identities = 231/343 (67%), Gaps = 21/343 (6%) Strand=Plus/Plus Query 19436 TTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGAC 19495 || |||| || || ||| | | || || || || |||||||| ||||||||| | ||| Sbjct 1643063 TTATAAACGGCCCCGAAGTGCTTAACAAGTACGTTGGTCAATCCGAAGAAAATATCCGAA 1643122 Query 19496 GTTTGTTTGCTGACGCTGAAGAAGA--ACAA---AAACGTTTAGGGCGCAAAAGTTCTTT 19550 | ||||| || || ||| |||| |||| ||| | ||| | ||| | | Sbjct 1643123 AGCTCTTTGCCGATGCCGAAAAAGAGTACAAGGAAAAGGGAGAGG-----AGAGTGGTCT 1643177 Query 19551 GCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG------TTCTGG 19604 || || || || | || |||||||| || | ||||| |||||||| | |||| Sbjct 1643178 CCATATCATTATTTTCGACGAATTGGATGCTGTGTGTAAACAAAGAGGAAGTGGTGCTGG 1643237 Query 19605 ---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661 || || ||| || || | ||||||||||||||| |||| ||| | || ||||| Sbjct 1643238 CGGTGGAACTGGTGTTGGAGATAGTGTTGTCAATCAACTGTTGTCTAAACTCGATGGTGT 1643297 Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721 | | || || || |||||| | ||||||| ||||| ||| | |||| | || || Sbjct 1643298 TGATCAGCTTAACAATATTCTGCTTATTGGAATGACAAATCGTATGGATATGATTGATGA 1643357 Query 19722 CGC-CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAAT 19763 ||| ||| | | |||| || || |||||| | | || ||||| Sbjct 1643358 CGCTCTTCTCA-GACCAGGACGTTTGGAAGTTCACATGGAAAT 1643399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397453936458130