Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq1 102 6e-17
>seq1
Length=3942387
Score = 102 bits (112), Expect = 6e-17
Identities = 231/343 (67%), Gaps = 21/343 (6%)
Strand=Plus/Plus
Query 19436 TTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTACGAC 19495
|| |||| || || ||| | | || || || || |||||||| ||||||||| | |||
Sbjct 1643063 TTATAAACGGCCCCGAAGTGCTTAACAAGTACGTTGGTCAATCCGAAGAAAATATCCGAA 1643122
Query 19496 GTTTGTTTGCTGACGCTGAAGAAGA--ACAA---AAACGTTTAGGGCGCAAAAGTTCTTT 19550
| ||||| || || ||| |||| |||| ||| | ||| | ||| | |
Sbjct 1643123 AGCTCTTTGCCGATGCCGAAAAAGAGTACAAGGAAAAGGGAGAGG-----AGAGTGGTCT 1643177
Query 19551 GCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGG------TTCTGG 19604
|| || || || | || |||||||| || | ||||| |||||||| | ||||
Sbjct 1643178 CCATATCATTATTTTCGACGAATTGGATGCTGTGTGTAAACAAAGAGGAAGTGGTGCTGG 1643237
Query 19605 ---TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGT 19661
|| || ||| || || | ||||||||||||||| |||| ||| | || |||||
Sbjct 1643238 CGGTGGAACTGGTGTTGGAGATAGTGTTGTCAATCAACTGTTGTCTAAACTCGATGGTGT 1643297
Query 19662 TAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAG 19721
| | || || || |||||| | ||||||| ||||| ||| | |||| | || ||
Sbjct 1643298 TGATCAGCTTAACAATATTCTGCTTATTGGAATGACAAATCGTATGGATATGATTGATGA 1643357
Query 19722 CGC-CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAAT 19763
||| ||| | | |||| || || |||||| | | || |||||
Sbjct 1643358 CGCTCTTCTCA-GACCAGGACGTTTGGAAGTTCACATGGAAAT 1643399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397453936458130
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |