Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq38 239 6e-58
seq35 104 3e-17
>seq38
Length=269250
Score = 239 bits (264), Expect = 6e-58
Identities = 1164/1813 (64%), Gaps = 59/1813 (3%)
Strand=Plus/Minus
Query 110368 ATAGTACATCCCGGTCTTGAGTCCTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTT 110427
||||||||| |||||||| | || |||||| | | |||||| || | | |||
Sbjct 57089 ATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTT 57030
Query 110428 GGACATCGTTGGACTTTCCATGAAGAGGTTCATACTTTGACTTTGGTCAATGAAGCGCCC 110487
| ||| || ||| | |||| | |||||| |||| ||| |||||||| ||
Sbjct 57029 GCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCAATGAATGCACC 56970
Query 110488 CCGTTGTGCCGCCATATCAATGACATCCTTCATCTTAA--TTTCCCAAACTGTGCGATAG 110545
|| | || ||||| | || | | ||| | | |||||||||| || ||
Sbjct 56969 ACGATCAGCAGCCATTTGAACAA--TTGTTCGTTGGGAGATTTCCCAAACAGTCTTGTAA 56912
Query 110546 AGATTCTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACC 110605
||| |||||| ||| |||| |||| | |||||| || ||||| || || ||| |
Sbjct 56911 AGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCA----TCAGC 56856
Query 110606 A-TGAGA---TCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAG 110661
| ||| | | |||||||| | ||||||||||| || | ||||| |||| ||
Sbjct 56855 AATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGA-GAA 56797
Query 110662 GTGCTTG-TTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTG 110720
| | | || || | || || || || || | | ||||||||||| |
Sbjct 56796 GCCATGGATTAACGACTTGGAATTCTCCGGCAAGAACACGACGAGAGTAGATGTTTGAAG 56737
Query 110721 TGTATGGTTCAAAGCATTCATTATTACCCAAGA-TTTGTGCGGTGGAGGCTGTTGGCATT 110779
|||| ||||| || ||||| || | |||||| |||| | ||| || || |||||
Sbjct 56736 TGTAAGGTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATA 56678
Query 110780 GGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCC 110839
||||| | | ||| ||| || | || | | ||||||| || ||| | | |||
Sbjct 56677 GGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCC 56618
Query 110840 CAGTCGTAGT--TGAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAG--CACCCCTTG 110895
|| || | | || | ||| | ||| ||||||| || | ||||| ||||| | |
Sbjct 56617 CAATCCCACAAATCAG-TAGGTGTAACCC-CCCACATATCGTATTGAAGTTCACCCTTAG 56560
Query 110896 GGACGCGGGAGAACCCTCAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTC-ACAGC 110954
||| ||||| || | | ||||||| || | || | | | || | || || |
Sbjct 56559 AGACTGGGGAG--CCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGA 56502
Query 110955 TCGCCTCCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTT 111014
|| ||| | ||||| || ||||| || || || | || | | |||||||
Sbjct 56501 AGAGGTCAAGGCA-GCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTT 56443
Query 111015 CATCTGAATCAAATGCGTAGCGGCACAA--AATAAATACATCCGCGAGACCTTGAACACC 111072
| || ||||||| | || | | | || ||| |||| || ||||||||||||||
Sbjct 56442 CTGGAGAGTCAAATG-GAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACC 56385
Query 111073 CAAACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCT-CAACGGGATAAAAAT 111131
| | | ||||||| || || | ||| ||||| || ||| | || ||||| | |
Sbjct 56384 AACAGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGT 56326
Query 111132 TTCTGTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATT-TCATGAAGTTTT 111190
| ||||||| | || | ||| | ||||| ||| | | || ||||| |||
Sbjct 56325 TGATGTCAATAATCTTATTCAAGTTTCTAACAACAA-CTTGGACAACCTCGTGAAGCTTT 56267
Query 111191 TCATAATCAAAAGTGCGAGTCTC-TTCAT--TGACATACTTTGGAAGGGCGATTGATGCC 111247
| ||||| |||| | ||| ||||| |||| | |||| | ||||| || |||
Sbjct 56266 TGGAAATCATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCC 56210
Query 111248 AAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTG 111307
|| || || ||| |||||| | | |||||| | |||||||| || || |||
Sbjct 56209 AAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTACTCAACGATTTCTGTGCACAAATTG 56150
Query 111308 GAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAG 111367
|| || ||| || |||| ||||||||||| |||||||||||||| |||||||||||
Sbjct 56149 GAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAA 56090
Query 111368 AGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACATCGGCG 111427
|||||| |||| | || ||||| || || | | ||||| | | ||||| |
Sbjct 56089 AGCATGAAGGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGA 56030
Query 111428 GC--TGGTACAATGGCGTTGGCCCGTCCCT-CCGCCTCGTACTTTGTGTAGAGGGCTTCA 111484
|| || || | || | ||| | ||| || ||||| |||||| || ||
Sbjct 56029 GCCTTGATAGTCTTGC---GACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCG 55973
Query 111485 AACTCCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCAT 111544
|||||||| || | || | | |||||| | || || || | |||| |||
Sbjct 55972 AACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAA 55913
Query 111545 TGACCACCTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGA 111604
| ||| | ||||| ||||||||||| || || |||||||||| || | ||||||
Sbjct 55912 TCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGA 55853
Query 111605 TCTC-TACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGAT 111663
|| | | || ||| | ||||| | || || || |||| ||||||||||| | |
Sbjct 55852 TCGCGTGCA-CGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAAC 55794
Query 111664 ATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGC 111717
|||||| |||||||||||||| || || || | | || ||||| ||| |
Sbjct 55793 ATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACC---AGGACGCTTATTACCACC 55737
Query 111718 TTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGA 111777
||||| ||||| | || ||| ||| || || || ||||| |||| ||||| | ||
Sbjct 55736 TTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATACCGTTAGA 55677
Query 111778 TTGACCATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCC 111837
| || || || || ||| | | | || | | || |||| | ||
Sbjct 55676 GTTTCCGTTGGTACCGGCAATGTATGCGCCAGTAGCACGGATTCGGTGAATGTTGAGACC 55617
Query 111838 AATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTT 111897
|||||| || || ||||||||| ||||| | | | ||| | || ||||| |
Sbjct 55616 AATACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATC 55557
Query 111898 GATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACC 111957
|| ||||||||| || ||||||||||||| || | || | | ||| |||||
Sbjct 55556 AATACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACC 55497
Query 111958 AGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATG 112016
||| |||||| ||||| | || || |||| ||| | | |||||| || |||||
Sbjct 55496 CGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACATCAAGTTGTATG 55438
Query 112017 TCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGT 112076
| || | || ||||| || || ||||| || || | || || ||||||| ||| |
Sbjct 55437 TTTCGATAGCACTTTCAATATCATCACCGTGAATACCAACGGCAACACGCATGATCATTT 55378
Query 112077 ACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTT 112136
||||| ||| | ||||||| || ||| |||| || ||| || ||||
Sbjct 55377 GTTGTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAAGGTATGAACGCTCGAGAGTTT 55318
Query 112137 TGAGACCAAAGTA 112149
||| ||||||||
Sbjct 55317 TGAATCCAAAGTA 55305
>seq35
Length=307329
Score = 104 bits (114), Expect = 3e-17
Identities = 151/211 (72%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 122670 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACC 122729
||||||||| || || ||||| || ||||| || |||||| || || | ||| |||||
Sbjct 74255 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACC 74196
Query 122730 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 122789
|||||||| | ||| | |||| | ||| || |||||||||||||| || || ||
Sbjct 74195 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGC 74136
Query 122790 CGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAAACCATTTCATTG 122848
|| || || | ||| |||| || |||| | ||| ||| | | || |||||| | |
Sbjct 74135 AGCGAATGCGACAAGACGTTGAGCAAAGGTG-GAGTTCTTATCTTGAATCCATTTGACAG 74077
Query 122849 CCCATTTCGCCTTCTTCTCAATACATGGTAC 122879
|||| | |||||||||| || || || ||
Sbjct 74076 CCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628028655729600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |