Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq38 172 7e-38 seq35 114 2e-20 >seq38 Length=269250 Score = 172 bits (190), Expect = 7e-38 Identities = 1103/1741 (63%), Gaps = 49/1741 (3%) Strand=Plus/Minus Query 117843 TAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTG 117902 |||||||| || ||||| | ||| ||||| || | |||||| || | | |||| Sbjct 57088 TAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTG 57029 Query 117903 GAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCC 117962 | || ||| | |||| | |||||| ||| |||||||| ||||| || Sbjct 57028 CCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCAATGAATGCACCA 56969 Query 117963 CGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCCTGTAGA 118020 ||||| || ||||| | || || || ||| | || ||||||| |||||| |||| | Sbjct 56968 CGATCAGCAGCCATTTGAA-CA-ATTGTTCGTTGGGAGATTTCCCAAACAGTCTTGTAAA 56911 Query 118021 GGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCA 118080 | ||| || ||| |||| |||| ||||||||| ||||||||||| | | | Sbjct 56910 GAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCAGCAATGA 56851 Query 118081 TGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAG--ATG 118138 | | | |||||||| | ||||||||||| || | || |||| | || ||| Sbjct 56850 TACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATG 56791 Query 118139 CTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGA-TAGATATTGGTCGTGT 118197 ||| || || || || || || || || | ||| ||||| || | |||| Sbjct 56790 G--ATTAACGACTTGGAATTCTCCGGCAAGAACACGACG-AGAGTAGATGTTTGAAGTGT 56734 Query 118198 ATGGCTCAAAGCACTCATTGTTACCCAAGA-TTTGGGCTGTGGAGGCTGTGGGCATGGGT 118256 | || || || || || ||| | |||||| |||||| |||| || || ||||| ||| Sbjct 56733 AAGGTTCGAAACATTCGTTGA-AGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATAGGT 56675 Query 118257 GCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAG 118316 || | || || ||| |||| || | || | | ||| || ||| | || |||||| Sbjct 56674 GCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCCCAA 56615 Query 118317 TCGTAGT--TGAGCTTTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACG 118374 || | | || | || | ||| ||||||||| | || || ||| | || Sbjct 56614 TCCCACAAATCAG-TAGGTGTAACCCC-CCACATATCGTATTGAAGTTCACCCTTAGAGA 56557 Query 118375 CTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCT 118434 |||| || || | | | || || |||||||| ||| || | ||| | | Sbjct 56556 CTGGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGACGGAAGAGG 56497 Query 118435 CGAGGGCTGCGTGATACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGG 118494 | ||| ||||| || || || || ||||| | || | ||||| || | Sbjct 56496 TCAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGAG 56437 Query 118495 AATCAAACGCGAGTCGGC-ACAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCA 118553 | ||||| | || || | || ||| |||| || |||||||| ||||| | | Sbjct 56436 AGTCAAATGGAAGACGAAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCAACAGCG 56378 Query 118554 ATTGGGCGATGTCTCATATTAGACTTCCGAGCGGTCTCC-ACGGGATAAAAATTCCTATC 118612 || || ||||| | | ||| || || || ||| | || ||||| | || | || Sbjct 56377 ATAGGTCGATGACGGAAATTGCTTTTTCGGGCC-TCTGCGACTGGATAGTAGTTGATGTC 56319 Query 118613 GATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATC 118672 |||| | |||| | ||| | ||||| | | || |||||||||| | |||| Sbjct 56318 AATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGGAAATC 56259 Query 118673 AAAACTGCGAGTCTC-TTCAT--TGACATACTTAGGAAGGGCGATTGACGCCAGATTACA 118729 | || | | ||| ||||| |||| | | || | ||||| || |||| ||||| Sbjct 56258 ATAAGTTCC---CTCATTCATGTTGACGAAAGTTGGTAAAGCGATGGAAGCCAAGTTACA 56202 Query 118730 CACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTT 118789 || |||||| ||| |||||| | ||||| |||||||| || || || Sbjct 56201 GCAAGCAACCTCATCTGGTGCAGAGTACTCAACGATTTCTGTGCACAAATTGGAGCTGCG 56142 Query 118790 AATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTA 118849 ||| || |||| ||||||||| || ||| |||| || |||||||||||||||||| | Sbjct 56141 AATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAGCATGAA 56082 Query 118850 TGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCAC 118909 || | || ||||| ||||| | || ||||| | | ||| | | ||| | Sbjct 56081 GGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGCCTTGAT 56022 Query 118910 AGTGGCGTTGGCTCGCCCCT---CTTCC---TCGTACTTTGTGTAGAGGGCTTCAAACTC 118963 ||| ||| || |||| || || ||||| |||||| || || ||||| Sbjct 56021 AGT---CTTG---CGACCCTTGCCTGCCTTTTCGTAACCCTCGTAGAGAGCCTCGAACTC 55968 Query 118964 TTCACCCACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACC 119023 || || | |||| | ||||| | | ||||| | ||||| ||| | || Sbjct 55967 CTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCAATCCCC 55908 Query 119024 ACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCG 119083 | || ||||| ||||||||||| || || || ||||| | || |||||||||| || Sbjct 55907 ATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAGATCGCG 55848 Query 119084 ACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGC 119143 ||| ||||||| | || ||||| || | || | || || | | |||||| Sbjct 55847 TGCACGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAACATCCGC 55788 Query 119144 GTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTAC 119200 ||||| || || ||||| || || | | || ||| | |||| | || | || Sbjct 55787 ATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTGATCAAC 55728 Query 119201 ATACCTCGCAGTGGCGTTAAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATT 119260 ||| || |||||| ||| || || || ||||| |||| |||||| | || | || || Sbjct 55727 ATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATACCGTTAGAGTTTCCGTT 55668 Query 119261 TGTCCCCCGAA--TACGAGACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCC 119318 || || || || | | | | | || | || ||| |||| | ||||||||| Sbjct 55667 GGTACCGGCAATGTATGCGCC--AGTAGCACGGATTCGGTGAATGTTGAGACCAATACCA 55610 Query 119319 CCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAG 119378 || || ||||||||| || || | | | | | |||| || ||||| || | Sbjct 55609 CCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAATACTG 55550 Query 119379 TCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTT 119437 || |||| | |||| |||||||| || | ||| || || || ||||| || Sbjct 55549 TCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTG-TGCTTGTGGAGTACCCGCAGA 55491 Query 119438 GAAGAGAGTTGGTGTCGCGTGGATGAACATACCT-TGGGACATCTTGTCGTAGGTCTCCA 119496 |||||| ||||| | || || |||| ||| | | |||||| || ||| || || | Sbjct 55490 GAAGAGTGTTGGCGAGGCATGTGTGAA-GTACTTGTTTGACATCAAGTTGTATGTTTCGA 55432 Query 119497 AGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCGCATAAACATGTATTGGG 119556 | ||| || || ||||||||||| | | || ||||| | ||| | ||| | Sbjct 55431 TAGCACTTTCAATATCATCACCGTGAATACCAACGGCAACACGCATGATCATTTGTTGTG 55372 Query 119557 G 119557 | Sbjct 55371 G 55371 >seq35 Length=307329 Score = 114 bits (126), Expect = 2e-20 Identities = 154/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 130027 GTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACC 130086 ||||||||| |||||||||||||||||||| || |||||| || || | ||| ||||| Sbjct 74255 GTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCATAAGACC 74196 Query 130087 CCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACA 130146 |||||||| | |||||| || | || || || ||||||||||| || || || Sbjct 74195 ACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTTCAACGGC 74136 Query 130147 CGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATC---AAACCACTTCAT 130203 ||||| || | ||||| | |||||||| ||| || |||| || ||| || | Sbjct 74135 AGCGAATGCGACAAGACGTTGAGCAAAGG---TGGAGTTCTTATCTTGAATCCATTTGAC 74079 Query 130204 CGCCCACTGCGCCTTTTTCTCGATACACGGGAC 130236 ||||| | ||||| |||| ||| || || || Sbjct 74078 AGCCCAGTCGGCCTTCTTCTTGATGCAAGGAAC 74046 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431906832560