Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq38 257 2e-63
seq35 134 2e-26
>seq38
Length=269250
Score = 257 bits (284), Expect = 2e-63
Identities = 1129/1752 (64%), Gaps = 71/1752 (4%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
||||| | ||| ||||||| || ||| | |||||||| || || || ||||| ||
Sbjct 55371 CCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATTGAAAGTGCT 55430
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| || |||||| || |||||| | | ||| |||| || || | ||||| |||||
Sbjct 55431 ATCGAAACATACAACTTGATGTCAAACAAGTAC-TTCACACATGCCTCGCCAACACTCTT 55489
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
| ||| ||||| ||| | | ||| | || ||||||||||||| || ||||||||
Sbjct 55490 CTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAGGAGGA 55549
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| || | ||||| || | ||| | | | ||||| ||||||||| || ||
Sbjct 55550 CAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAATGCCGG 55609
Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520
|||||||| | |||| || | | || | | | ||| || || ||
Sbjct 55610 TGGTATTGGTCTCAACATTCACCGAATCCGTGCTACTGGCGCATACATTGCCGGTACCAA 55669
Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580
|| | || | ||||| |||| ||||| || || || ||| ||| || | |||||
Sbjct 55670 CGGAAACTCTAACGGTATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGT 55729
Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634
|||||| ||| ||||| || | | || || || ||||||||||||||
Sbjct 55730 TGATCAAGGTGGTAATAAGCGTCCT---GGTGCCTTTGCTGTTTACCTTGAGCCATGGCA 55786
Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694
|||||| | | ||||||||||| | || || || || | || || | || ||
Sbjct 55787 TGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAAGAAGAAGTTCG-TG 55845
Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
| ||||||||||||| ||| | |||||||| ||||| ||||||||| | ||||| |||
Sbjct 55846 CACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGA 55905
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813
||| ||||| ||||| | || || || | || ||| | | |||| || |
Sbjct 55906 ATGGGGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTATGGCG 55965
Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACG---AGGAAG---AAGGTCGGGCGACTGCGA 104867
||||||| || || || ||| |||| ||| || | ||||| |||| |
Sbjct 55966 AGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAAGACTATCA 56025
Query 104868 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927
| ||| | | ||| | | ||||| || ||||||||||||| || | |
Sbjct 56026 AG------GCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATC 56079
Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987
| | |||||||||||| || || || ||| | ||||| || |||||||| ||||| |
Sbjct 56080 CCTTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGTACTA 56139
Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047
| || |||||| | || ||||||||| | || | | | ||||||| |||
Sbjct 56140 TTCGCAGCTCCAATTTGTGCACAGAAATCGTTGAGTACTCTGCACCAGATGAGGTTGCTT 56199
Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTT 105106
|||||| | || || |||||| | |||| | | | | || | | || | |
Sbjct 56200 GCTGTAACTTGGCTTCCATCGCT-TTACCAACTTTCGTCAACATGAATGAGGGAACTTAT 56258
Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166
|||| |||| || ||||| ||| || ||| | |||| | || | |||||
Sbjct 56259 GATTTCCAAAAGCTTCACGAGGTTGTCCAAGTTGTTGTTAGAAACTTGAATAAGATTATT 56318
Query 105167 GATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225
|| | || | || || || | ||| || || ||| ||| | | || || || ||
Sbjct 56319 GACATCAACTACTATCCAGTCGCAGA-GGCCCGAAAAAGCAATTTCCGTCATCGACCTAT 56377
Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGA 105282
| | | |||||||| ||||| || |||| ||| | |||| ||| | |||||||
Sbjct 56378 CGCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTTGA 56434
Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342
|| ||||| || | |||| | || || |||||||| || ||||| || ||
Sbjct 56435 CTCTCCAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGCTGC-CT 56493
Query 105343 TGAGGCGAGTTC---AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399
||| | ||| ||| | ||| ||| ||| ||||| ||||||| | | || ||
Sbjct 56494 TGA--CCTCTTCCGTCGAGATCGCAAAGGAACTTGGCCCATACGAAACCTATCAAGGCTC 56551
Query 105400 TCCAGCTTCACAAGGGGTG--CTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TC 105455
|||| || | | ||||| ||||||| |||||||||| ||| | ||| | || |
Sbjct 56552 CCCAG--TCTCTAAGGGTGAACTTCAATACGATATGTGGG-GGGTTACACCTA-CTGATT 56607
Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515
| || ||||| || | ||| || ||||||| | | || | || ||| |||||
Sbjct 56608 TGTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACTCTCTCC 56667
Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTT 105574
| | || || ||||| || || ||| | |||| |||||| | || ||||| ||
Sbjct 56668 TAGTTGCACCTATGCCTACTGCTAGCACATCCCAAATTCTTGGCT-TCAACGAATGTTTC 56726
Query 105575 GAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633
||||| ||||| | |||||||| ||| | | || || ||||| || | ||
Sbjct 56727 GAACCTTACACTTCAAACATCTACTCT-CGTCGTGTTCTTGCCGGAGAATTCCAAGTCGT 56785
Query 105634 CAA--CA-AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690
|| || || |||| | ||||| || || ||||||||||| | |||||||
Sbjct 56786 TAATCCATGGCTTCTC---AAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATATGAA 56842
Query 105691 GGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATG 105746
| | | ||| || ||| ||||| |||||||||||||| |||||||| ||
Sbjct 56843 GAACCGTATCATTGCTGA----TGGTGGATCCATTCAAAATATCCCCAATATTCCAGCTG 56898
Query 105747 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACAT 105804
| || ||| | ||| || |||||||||| || | ||| | | || | ||
Sbjct 56899 ACATCAAGGCTCTTTACAAGACTGTTTGGGAAATCTCCCAACGAACAA--TTGTTCAAAT 56956
Query 105805 GGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAG 105864
||| || ||||||||| |||||||||||| |||| ||||| | |||| |
Sbjct 56957 GGCTGCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATTCACATGAAGGA 57016
Query 105865 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924
||| || ||| |||| | | || ||||| | ||||||| |||| | || ||
Sbjct 57017 TCCTACAATGGGCAAGATTACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGAC 57076
Query 105925 GGGGATGTATTA 105936
|| ||||| ||
Sbjct 57077 CGGAATGTACTA 57088
>seq35
Length=307329
Score = 134 bits (148), Expect = 2e-26
Identities = 159/214 (74%), Gaps = 6/214 (3%)
Strand=Plus/Plus
Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790
|||||| || || | ||||| || || |||||| | || ||| || |||| || ||
Sbjct 74045 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTC 74104
Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850
|||||||| | || || ||||||| || ||||| || ||||||||||| ||
Sbjct 74105 CA---CCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGG 74161
Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910
|||||| | |||| | |||||||||||||| ||||| ||| | || ||| ||||||
Sbjct 74162 ATCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTC 74221
Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944
|||||| || ||||| |||||||| || ||||||
Sbjct 74222 CAACGAACTCATCTCCCGTGACGAAGGTCTCCAC 74255
Score = 84.2 bits (92), Expect = 3e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 95170 AATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAG 95229
|| |||||||||||||||||||||||| | | | ||| ||||| |||||||||||||||
Sbjct 74481 AACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTAACTTCTTCGAAAAG 74540
Query 95230 AGGGTTGGGGACTA 95243
|| ||||| || ||
Sbjct 74541 AGAGTTGGTGATTA 74554
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583257694136240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |