Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq38 257 2e-63 seq35 134 2e-26 >seq38 Length=269250 Score = 257 bits (284), Expect = 2e-63 Identities = 1129/1752 (64%), Gaps = 71/1752 (4%) Strand=Plus/Plus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 ||||| | ||| ||||||| || ||| | |||||||| || || || ||||| || Sbjct 55371 CCACAACAAATGATCATGCGTGTTGCCGTTGGTATTCACGGTGATGATATTGAAAGTGCT 55430 Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340 | || |||||| || |||||| | | ||| |||| || || | ||||| ||||| Sbjct 55431 ATCGAAACATACAACTTGATGTCAAACAAGTAC-TTCACACATGCCTCGCCAACACTCTT 55489 Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400 | ||| ||||| ||| | | ||| | || ||||||||||||| || |||||||| Sbjct 55490 CTCTGCGGGTACTCCACAAGCACAACTTTCATCATGCTTCCTTATCGACATGAAGGAGGA 55549 Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460 | || | ||||| || | ||| | | | ||||| ||||||||| || || Sbjct 55550 CAGTATTGATGGTATTTACGATACTTTGAAGATTTGTGCTATGATCTCAAAGAATGCCGG 55609 Query 104461 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 104520 |||||||| | |||| || | | || | | | ||| || || || Sbjct 55610 TGGTATTGGTCTCAACATTCACCGAATCCGTGCTACTGGCGCATACATTGCCGGTACCAA 55669 Query 104521 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 104580 || | || | ||||| |||| ||||| || || || ||| ||| || | ||||| Sbjct 55670 CGGAAACTCTAACGGTATCGTTCCTATGCTCCGAGTTTTCAACAACACTGCCAGATATGT 55729 Query 104581 AAATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCA 104634 |||||| ||| ||||| || | | || || || |||||||||||||| Sbjct 55730 TGATCAAGGTGGTAATAAGCGTCCT---GGTGCCTTTGCTGTTTACCTTGAGCCATGGCA 55786 Query 104635 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTG 104694 |||||| | | ||||||||||| | || || || || | || || | || || Sbjct 55787 TGCGGATGTTTTTGAGTTCCTTGATCTACGCAAAAATCATGGCAAAGAAGAAGTTCG-TG 55845 Query 104695 C-CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753 | ||||||||||||| ||| | |||||||| ||||| ||||||||| | ||||| ||| Sbjct 55846 CACGCGATCTCTTCTACGCCTTGTGGATTCCTGATCTATTCATGAAGCGTGTTGAAAAGA 55905 Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTG 104813 ||| ||||| ||||| | || || || | || ||| | | |||| || | Sbjct 55906 ATGGGGATTGGACTCTCATGTGCCCCAACGAATGTCCAGGTTTAGCAGATGTTTATGGCG 55965 Query 104814 AGGAGTTTGAAGCCCTTTACACAAAGTACG---AGGAAG---AAGGTCGGGCGACTGCGA 104867 ||||||| || || || ||| |||| ||| || | ||||| |||| | Sbjct 55966 AGGAGTTCGAGGCTCTCTACGAGGGTTACGAAAAGGCAGGCAAGGGTCGCAAGACTATCA 56025 Query 104868 CGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACAC 104927 | ||| | | ||| | | ||||| || ||||||||||||| || | | Sbjct 56026 AG------GCTCAAAAACTTTGGTACTCCATTCTTGAGGCTCAAACCGAGACCGGAAATC 56079 Query 104928 CATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGA 104987 | | |||||||||||| || || || ||| | ||||| || |||||||| ||||| | Sbjct 56080 CCTTCATGCTTTACAAGGATGCATGCAACAAGAAGAGCAACCAAAAGAACCTGGGTACTA 56139 Query 104988 TCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTG 105047 | || |||||| | || ||||||||| | || | | | ||||||| ||| Sbjct 56140 TTCGCAGCTCCAATTTGTGCACAGAAATCGTTGAGTACTCTGCACCAGATGAGGTTGCTT 56199 Query 105048 TGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAG-ACATTT 105106 |||||| | || || |||||| | |||| | | | | || | | || | | Sbjct 56200 GCTGTAACTTGGCTTCCATCGCT-TTACCAACTTTCGTCAACATGAATGAGGGAACTTAT 56258 Query 105107 GATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATT 105166 |||| |||| || ||||| ||| || ||| | |||| | || | ||||| Sbjct 56259 GATTTCCAAAAGCTTCACGAGGTTGTCCAAGTTGTTGTTAGAAACTTGAATAAGATTATT 56318 Query 105167 GATAGAAATTTTTACCCCGTTG-AGACTGCTCGTAAATCTAATATGAGACACCGTCCAAT 105225 || | || | || || || | ||| || || ||| ||| | | || || || || Sbjct 56319 GACATCAACTACTATCCAGTCGCAGA-GGCCCGAAAAAGCAATTTCCGTCATCGACCTAT 56377 Query 105226 TGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCAT---TCTTTGTCGCCACGCATTTGA 105282 | | | |||||||| ||||| || |||| ||| | |||| ||| | ||||||| Sbjct 56378 CGCTGTTGGTGTTCAAGGTCTTGCTGATGCTTTCTTGGCTCTTCGTCTTC---CATTTGA 56434 Query 105283 TTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCT 105342 || ||||| || | |||| | || || |||||||| || ||||| || || Sbjct 56435 CTCTCCAGAAGCCAAACACCTCAACATACAAATTTTCGAGACCATCTACCACGCTGC-CT 56493 Query 105343 TGAGGCGAGTTC---AGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTC 105399 ||| | ||| ||| | ||| ||| ||| ||||| ||||||| | | || || Sbjct 56494 TGA--CCTCTTCCGTCGAGATCGCAAAGGAACTTGGCCCATACGAAACCTATCAAGGCTC 56551 Query 105400 TCCAGCTTCACAAGGGGTG--CTTCAATTTGATATGTGGGAAGGTGAGACCAAGCT--TC 105455 |||| || | | ||||| ||||||| |||||||||| ||| | ||| | || | Sbjct 56552 CCCAG--TCTCTAAGGGTGAACTTCAATACGATATGTGGG-GGGTTACACCTA-CTGATT 56607 Query 105456 ACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCC 105515 | || ||||| || | ||| || ||||||| | | || | || ||| ||||| Sbjct 56608 TGTGGGATTGGGACTCTTTGAAGCAATCCATCAAGCAACACGGAATCCGCAACTCTCTCC 56667 Query 105516 TCATGGCTCCAATGCCAACAGCCTCCACCGCACAAA-TCTTGGGTAATAATGAATGCTTT 105574 | | || || ||||| || || ||| | |||| |||||| | || ||||| || Sbjct 56668 TAGTTGCACCTATGCCTACTGCTAGCACATCCCAAATTCTTGGCT-TCAACGAATGTTTC 56726 Query 105575 GAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGT 105633 ||||| ||||| | |||||||| ||| | | || || ||||| || | || Sbjct 56727 GAACCTTACACTTCAAACATCTACTCT-CGTCGTGTTCTTGCCGGAGAATTCCAAGTCGT 56785 Query 105634 CAA--CA-AGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAA 105690 || || || |||| | ||||| || || ||||||||||| | ||||||| Sbjct 56786 TAATCCATGGCTTCTC---AAGGACCTTGTCGATATGGGTCTCTGGTCTGACAATATGAA 56842 Query 105691 GGA---TCTCA-TGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGGATATTCCAAATG 105746 | | | ||| || ||| ||||| |||||||||||||| |||||||| || Sbjct 56843 GAACCGTATCATTGCTGA----TGGTGGATCCATTCAAAATATCCCCAATATTCCAGCTG 56898 Query 105747 AAATTAAGAAGTTGTACCGCACAGTTTGGGAAA--TCAAGATGAAGGATGTCATTGACAT 105804 | || ||| | ||| || |||||||||| || | ||| | | || | || Sbjct 56899 ACATCAAGGCTCTTTACAAGACTGTTTGGGAAATCTCCCAACGAACAA--TTGTTCAAAT 56956 Query 105805 GGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCTTCATGGAAAG 105864 ||| || ||||||||| |||||||||||| |||| ||||| | |||| | Sbjct 56957 GGCTGCTGATCGTGGTGCATTCATTGATCAATCTCAATCAATGAACATTCACATGAAGGA 57016 Query 105865 TCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGGGTCTCAAAAC 105924 ||| || ||| |||| | | || ||||| | ||||||| |||| | || || Sbjct 57017 TCCTACAATGGGCAAGATTACATCCATGCATTTTGCTGGTTGGAAATTGGGTTTGAAGAC 57076 Query 105925 GGGGATGTATTA 105936 || ||||| || Sbjct 57077 CGGAATGTACTA 57088 >seq35 Length=307329 Score = 134 bits (148), Expect = 2e-26 Identities = 159/214 (74%), Gaps = 6/214 (3%) Strand=Plus/Plus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 |||||| || || | ||||| || || |||||| | || ||| || |||| || || Sbjct 74045 AGTTCCTTGCATCAAGAAGAAGGCCGACTGGGCTGTCAAATGGATTCAAGATAAGAACTC 74104 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 |||||||| | || || ||||||| || ||||| || ||||||||||| || Sbjct 74105 CA---CCTTTGCTCAACGTCTTGTCGCATTCGCTGCCGTTGAAGGCATCTTCTTCTCCGG 74161 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 |||||| | |||| | |||||||||||||| ||||| ||| | || ||| |||||| Sbjct 74162 ATCCTTCGCCTCTATCTTCTGGCTCAAGAAGCGTGGTCTTATGGCCGGACTCACCTTCTC 74221 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCAC 94944 |||||| || ||||| |||||||| || |||||| Sbjct 74222 CAACGAACTCATCTCCCGTGACGAAGGTCTCCAC 74255 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 95170 AATCCATTTGACTTCATGGAGAACATTAGCCTCGACGGGAAGACAAACTTCTTCGAAAAG 95229 || |||||||||||||||||||||||| | | | ||| ||||| ||||||||||||||| Sbjct 74481 AACCCATTTGACTTCATGGAGAACATTTCCTTGGCCGGCAAGACTAACTTCTTCGAAAAG 74540 Query 95230 AGGGTTGGGGACTA 95243 || ||||| || || Sbjct 74541 AGAGTTGGTGATTA 74554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583257694136240