Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq3 167 7e-36
seq1 152 2e-31
seq17 102 2e-16
seq13 96.9 1e-14
>seq3
Length=2676204
Score = 167 bits (184), Expect = 7e-36
Identities = 178/235 (76%), Gaps = 0/235 (0%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | | || || | ||| | ||| || || |||||||| || |
Sbjct 1949771 TTTGCATACCACCACGGAGACGAAGGACCAAATGTAAAGTCGATTCCTTTTGAATGTTGT 1949830
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
|||| || | ||| || ||||| |||||||| || ||||||||||| |||||||| ||||
Sbjct 1949831 AATCCGAAAGTGTACGACCATCCTCAAGTTGCTTACCAGCAAAGATAAGACGTTGTTGAT 1949890
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| || || || || || ||||| || || || | || ||||| || || | ||| ||||
Sbjct 1949891 CGGGTGGGATACCCTCCTTATCTTGGATCTTTGACTTCACATTGTCGATGGTATCCGATG 1949950
Query 140683 GTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|||||| || | || | |||||||||||| || || || || || ||||||||
Sbjct 1949951 ATTCAACCTCCAAAGTGATTGTCTTTCCGGTAAGGGTCTTGACGAAGATCTGCAT 1950005
Score = 152 bits (168), Expect = 2e-31
Identities = 165/219 (75%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
|||||||||||| | ||| || || | ||||| |||||||| || || |||||||||||
Sbjct 1950003 CATACCACCACGAAGTCTGAGGACCAAGTGAAGGGTAGACTCCTTCTGGATATTATAATC 1950062
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
|| | || || || ||||| ||||| |||||||| || || | |||||| || || ||
Sbjct 1950063 GGAAAGGGTGCGACCGTCTTCCAGTTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCGGG 1950122
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|||||| ||||| || || ||||| |||| || || || || || | || || | |||
Sbjct 1950123 AGGAATGCCTTCCTTGTCTTGAATCTTAGACTTAACGTTGTCGATGGTGTCTGAAGATTC 1950182
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTAC 140725
|| ||||| || | ||||||||||| || || || ||
Sbjct 1950183 GACCTCAAGGGTGATGGTCTTTCCGGTAAGAGTCTTAAC 1950221
Score = 138 bits (152), Expect = 3e-27
Identities = 145/191 (76%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 140547 TCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAG 140606
|| ||||||||||| ||||| || | |||| || || || | ||| ||||| ||||||
Sbjct 1949587 TCCTTTTGAATATTGTAATCCGAAAGGGTTCTGCCGTCCTCCAATTGCTTTCCTGCAAAG 1949646
Query 140607 ATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTA 140666
|| | ||||| |||||||| ||||| || || || |||||||| || | ||||||||||
Sbjct 1949647 ATCAATCGTTGTTGATCAGGTGGAATGCCCTCCTTGTCCTGAATCTTTGATTTTACATTA 1949706
Query 140667 TCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACA 140726
||||| | ||| || | ||| || || | ||||| ||||| || || | || || |||
Sbjct 1949707 TCAATGGTATCTGACGATTCCACCTCTAATGTAATGGTCTTGCCAGTCAAAGTCTTGACA 1949766
Query 140727 AAAATCTGCAT 140737
|| || |||||
Sbjct 1949767 AAGATTTGCAT 1949777
Score = 136 bits (150), Expect = 1e-26
Identities = 159/212 (75%), Gaps = 2/212 (1%)
Strand=Plus/Plus
Query 140503 TTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTAT 140562
||| |||||||||||| | ||| || || | || |||||||||||||| || || || |
Sbjct 1950282 TTTGCATACCACCACGAAGTCTGAGGACCAAGTGGAGAGTAGACTCTTTCTGGATGTTGT 1950341
Query 140563 AATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGAT 140622
| ||| || || || |||||||||||||||||||| || || || | ||| || || |
Sbjct 1950342 AGTCACTCAAGGTGCGACCATCTTCAAGTTGTTTTCCGGCGAAAATCAAACGCTGTTGGT 1950401
Query 140623 CAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATG 140682
| ||||||||||| || || ||||| || || | || ||||| || || | || | ||
Sbjct 1950402 CGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTC-GCTG 1950460
Query 140683 G-TTCAACTTCAAGTGTAACTGTCTTTCCGGT 140713
| ||||| || || |||| ||||| |||||
Sbjct 1950461 GACTCAACCTCGAGGGTAATAGTCTTACCGGT 1950492
>seq1
Length=3942387
Score = 152 bits (168), Expect = 2e-31
Identities = 262/379 (69%), Gaps = 6/379 (2%)
Strand=Plus/Plus
Query 378121 TCAAATCCATCATCTCCATATGAGAATTGAACAATTTTATCTTTATTGTTTCTTACAGTC 378180
|| || ||||| || ||||| ||| |||||||| | | | ||| | || ||
Sbjct 1098965 TCTAAACCATCTTCACCATAGACGAACTGAACAATATCACCGAGGGAGTTACGAACGGTA 1099024
Query 378181 ATATCATATCTAACCATTAAATCTTCTAATGCTTTAATAAGTCGTCGAGAAATATAACCA 378240
|||||| | |||| | ||| || | ||||| | ||| || || ||| ||||||
Sbjct 1099025 CCGTCATATTTGGCCATGACATCCTCAAGGGCTTTGACAAGACGACGTTGAATGTAACCA 1099084
Query 378241 GTTTGACTAGTTTTAACTGCAGTATCAATTAAACCAACACGACCACCCATTGCATGGAAG 378300
|||| ||| ||||| ||||||||||| ||||| |||||||| ||||||| || ||
Sbjct 1099085 GTTTCTGCAGTCTTAACCGCAGTATCAATCAAACCTTCACGACCAGCCATTGCGTGAAAA 1099144
Query 378301 AATAATTCAGTAGGAGTAAGTCCACCAATAAATGAACTCTCAATAAATCCTCTTGCGCCT 378360
|| || || || || || || || | || | | || |||||| ||| ||||| | ||
Sbjct 1099145 AAGAACTCTGTTGGGGTGAGACCTCTAAGATACGAGTTCTCAACAAACCCTCTCGATTCT 1099204
Query 378361 GGCGAATCATCATATTTTGTATAATGAGGTAATGTACGATTCTCAAACCCATATGGAATT 378420
||||||| ||| | || || |||| || | ||||||| || || || | || ||
Sbjct 1099205 GGCGAATAATCGTCCTTGGTGAAATGTGGAAGAGTACGATACTTGAAACCGAAAGGGATA 1099264
Query 378421 CGTTTTCCATCAACATTCTGTTGAC---CAAGTGCAGAAACCATTTGAGCAATATTTAAA 378477
||||| || ||||| ||||||| |||| ||||| ||| |||| |||||| | |
Sbjct 1099265 CGTTTACCTTCAACGGATTGTTGACCCACAAGGGCAGA---CATCTGAGAAATATTGATA 1099321
Query 378478 TCACTACCTTTAGACCCAG 378496
| ||||||||| ||||
Sbjct 1099322 GTAGAACCTTTAGAACCAG 1099340
Score = 118 bits (130), Expect = 3e-21
Identities = 509/786 (65%), Gaps = 29/786 (4%)
Strand=Plus/Minus
Query 349565 ATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTA 349624
||||||||||||||||||| | || || | | || || | || || || |||||
Sbjct 139588 ATGAAGGAAATTGCTGAAGTCAAGTTGGGCAAGAAGGTCACAAAGGCCGTCATCACTGTC 139529
Query 349625 CCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGG 349684
||||| || || || || ||| ||| || || || |||||||| ||| || ||
Sbjct 139528 CCAGCTTACTTCAACGACAACCAACGTCAAGCTACCAAGGATGCTGGTGCCATCGCTGGT 139469
Query 349685 TTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGAT 349744
| || || || | || || || || || || ||||| || ||||| || || |||| |
Sbjct 139468 CTTAACGTCCTCCGTATCATCAACGAGCCTACCGCTGCTGCCATTGCTTACGGTCTTGGT 139409
Query 349745 AAAATGAGTGACCAAGaaaaa----aaTATTCTTATTTTTGATTTAGGTGGTGGTACTTT 349800
|| | |||| ||| | || |||| || | ||| | |||||||| |||||
Sbjct 139408 -GCTGGAAAGTCCAACAAAGAGCGTAACGTTCTCATCTACGATCTTGGTGGTGGAACTTT 139350
Query 349801 TGATGTATCACTAC-TAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTG 349859
||||| || || | ||||| | ||| || | || ||||| || ||||| ||||
Sbjct 139349 CGATGTTTCTCTTCTTAACA-TCCAAGGTGGTGTCTTCACTGTTAAGGCTACTGCCGGTG 139291
Query 349860 ATACACATCTTGGTGGAGAAGATTTTGATA--ATCGT-CTCGTTTCGCATTTTGTTAAAG 349916
| || ||| | || || ||||||| |||| | | | |||| ||| || || |
Sbjct 139290 ACACCCATTTGGGAGGTCAAGATTTCGATACCAACTTGCTCG---AGCACTTCAAGAAGG 139234
Query 349917 AATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAA 349976
| || | | | | || | || || | |||| | || | ||||| || |
Sbjct 139233 AGTTCACCAGAAAGACCAAGAAGGACATGTCCAACGATCCCCGTGCCCTCCGTCGTCTTA 139174
Query 349977 GAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTAC--TACCCAAACCTCTATTGA 350034
||||||| || |||||||||||||| | | || | || | || ||| ||||
Sbjct 139173 GAACTGCTTGCGAACGTGCTAAGCGAAC--TCTCTCCAACGGTGCCTCCACCAACGTTGA 139116
Query 350035 AATTGATTCTCTTGCT-GATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTG 350093
||||| || |||| | ||||| | || ||| | | || || |||||| | || |
Sbjct 139115 GATTGACTC-CTTGTTCGATGGTGAGGACTTCAATGCTCAAATCACCCGTGCTAGATTCG 139057
Query 350094 AAGA-ATTA--TGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAA 350150
|||| ||| | | || ||| | | || |||| ||||| | | || | |
Sbjct 139056 AAGACCTTAACTCCAAGG---CTTTCAACGGTACTTTGGAGCCTGTTGCTCAGGTTCTCA 139000
Query 350151 AAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210
| ||||| || | || | || ||||||| | ||| | |||||||||||||| |
Sbjct 138999 AGGATGCCAACCTTGATAAGAGCAAGGTTGATGAGATCGTTCTTGTTGGTGGTTCTACCC 138940
Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGAT 350270
|||| |||| | ||||| || | | |||||| || |||| |||||| || |||
Sbjct 138939 GTATCCCAAGAATTCAAAAGCTCTTGAGTGAGTTCTTCGATGG-AAAGAA-GTTGGAGAA 138882
Query 350271 CA--ATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATC 350328
| || || || ||||| |||||||| || ||||| ||||| || || ||| | ||
Sbjct 138881 GAGCATCAACCCTGATGAGGCTGTTGCCTACGGTGCCGCTGTCCAAGCTGGTATCCTTTC 138822
Query 350329 TGGAAA 350334
|||||
Sbjct 138821 CGGAAA 138816
Score = 84.2 bits (92), Expect = 7e-11
Identities = 110/152 (72%), Gaps = 3/152 (2%)
Strand=Plus/Plus
Query 377443 AATATTTCTTCAATGCGTGGCACACCACGTGTAACATTCGATTTAGATGCAACACCAGCA 377502
|| ||||| | || ||||| |||||| | ||||| ||| || || | | |||||
Sbjct 1098263 AAAATTTCCTTAAGACGTGGAACACCAAGGGTAACGTTC---TTGGACGAGATACCAGTG 1098319
Query 377503 AAGTGGAAAGTATTAAGAGTTAATTGAGTAGTGGGCTCACCAATTGACTGCGCTGCAATA 377562
|| ||||| || || | || | ||| || | || |||||||| ||||| || ||||
Sbjct 1098320 AAATGGAAGGTGTTCAAGGTCATTTGTGTGGCTGGTTCACCAATAGACTGTGCAGCAAGC 1098379
Query 377563 ACGCCAACCATTTCTCCAGGATTGACAATAGC 377594
|| |||||||| || ||||||||||| | |||
Sbjct 1098380 ACACCAACCATCTCACCAGGATTGACCAAAGC 1098411
>seq17
Length=875485
Score = 102 bits (112), Expect = 2e-16
Identities = 130/179 (73%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
||||| || || ||||| || | || || || ||||| | ||| |||||||| |||||
Sbjct 658243 TTTTGGATGTTGTAATCTGAGAGAGTACGTCCGTCTTCCAATTGCTTTCCAGCGAAGATC 658184
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
| |||||| ||||| ||||||||||| || || ||||| || || | || ||||| ||
Sbjct 658183 AAACGTTGTTGATCGGGAGGAATTCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCG 658124
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728
|| | || || | || || ||||| || | ||||| || || || || || || ||
Sbjct 658123 ATGGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTAAGGGTCTTGACGAA 658065
>seq13
Length=1254118
Score = 96.9 bits (106), Expect = 1e-14
Identities = 218/327 (67%), Gaps = 3/327 (1%)
Strand=Plus/Plus
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
|| ||||||||| | || ||| |||| | || | || || || | || ||| |||||
Sbjct 582378 AAGATGAAGGAAGTCGCCGAATCATACCTCGGAAAGACTGTTACCCACGCAGTTGTTACT 582437
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| |||||||| || || || ||| | || || || ||||| || | ||||||
Sbjct 582438 GTTCCAGCCTACTTCAACGACAACCAAAGACAAGCCACCAAGGATGCCGGTATCATTGCC 582497
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| || || ||||| | || | || ||||| || || ||||| ||||| || || |
Sbjct 582498 GGTTTGAACGTTCTCCGTATCGTCAACGAACCTACCGCCGCAGCTATTGCCTACGGTTTG 582557
Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801
|| || || ||| ||| | ||| || | | |||| | ||||| || || ||
Sbjct 582558 GACAA---GACTGAAGGTGAACGTCAAATTATTGTCTATGATCTCGGTGGAGGAACCTTC 582614
Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861
||||| || || || | |||| || | ||||| ||| | ||||| |||||
Sbjct 582615 GATGTTTCTCTTCTCTCCATTGATCGTGGTGTCTTTGAGGTTCTTTCTACTGCCGGTGAC 582674
Query 349862 ACACATCTTGGTGGAGAAGATTTTGAT 349888
|| || | || ||||||||||| |||
Sbjct 582675 ACTCACTTGGGAGGAGAAGATTTCGAT 582701
Score = 95.1 bits (104), Expect = 4e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 182904 TTTTCAAGTGCGCTAACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATC 182963
|| ||| |||| |||| ||||| || || || | ||||| || || || || |||||
Sbjct 583471 TTGTCACCTGCGGTAACCTTTAAGATTCCGTTGGCGTCAAGCTCGAAAGAAACCTCAATT 583412
Query 182964 TGTGGAACACCTCGTGGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTA 183023
||||||||||| ||||| ||||||||| || || || |||| ||| | || ||
Sbjct 583411 TGTGGAACACCACGTGGTGCTGGTGGAATACCGGTCAACTCGAATTTACCGAGGTTGTTG 583352
Query 183024 TTATCTTTAGTTCTTGCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTA 183083
|| ||||| || ||| ||| || || ||||| ||||| || || |||| || |||
Sbjct 583351 TTGTCTTTTGTCATTGTTCTTTCTCCCTCATAGACTTGGATCAAGACAACTGGTTGGTTA 583292
Query 183084 TC 183085
||
Sbjct 583291 TC 583290
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515246129552078
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