Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq35 136 3e-27 >seq35 Length=307329 Score = 136 bits (150), Expect = 3e-27 Identities = 574/906 (63%), Gaps = 68/906 (8%) Strand=Plus/Minus Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307 |||||| |||||||| || |||| |||||||||||| ||||| ||||| | || Sbjct 74569 ACACCAGCCTTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTAGTCTTGCCGGCCAAG 74510 Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC---ACACTTT 4364 ||||| || ||||| || ||||| || || | | ||||| ||| || || | Sbjct 74509 GAAATGTTCTCCATGAAGTCAAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCC--- 74453 Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424 | ||| | || | || ||||| || ||||| || || || ||||||| | |||| Sbjct 74452 AAAGCGATGAGGAGACGATCAGCAACGAATTCGATGTATTGCTTCATGAGGGTGGAGTTC 74393 Query 4425 ATTCCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGC 4483 || || | | | | || ||| || || | ||||| || ||||| || || | ||||| Sbjct 74392 ATGCCCAAAAGAGCACA-AGGAAGAGCCTCGGTCAAGAATTCTTGCTCAATTGCGACGGC 74334 Query 4484 TTCTGTGATTATATCTTTTATTTTATCTTTAGATGGT---TTATTTACTAAGTATCCAAA 4540 || ||||| | |||| | | || ||||| | || | | | || Sbjct 74333 CTCGGTGATAACGTCTTGGACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAG---AA 74277 Query 4541 CAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAA 4600 | | || || ||||| || | ||||||||| | | || |||||||| || || Sbjct 74276 GAGGAGGCATGCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAA 74217 Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660 || | ||||| ||| | ||| | ||| || ||||| || |||| ||| || || || || Sbjct 74216 GGTGAGTCCGGCCATAAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGA 74157 Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTT 4720 ||||| |||||||| ||||| || || || || | || | || | | | || Sbjct 74156 GAAGAAGATGCCTTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTT 74097 Query 4721 GTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAA---------T 4771 |||| ||||||||| | ||||||| || || ||||| | ||| |||| | Sbjct 74096 ATCTTGAATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGT 74037 Query 4772 TGT--GT-------ATATAGCGTTAAATAATT------TACTTTTTTCAAATG------- 4809 ||| || || || | | || ||| |||| | |||| | Sbjct 74036 TGTTAGTTGAATTCATGTAACAATGTATGATTGTAACCTACTGGTATCAATAGCATTGAA 73977 Query 4810 --GGT------------CTTGA------ATATAAGTGTCTATTAGTAGGCTATACATTTC 4849 ||| |||| ||||| ||||| || || || || |||| Sbjct 73976 GAGGTATGTCTTTTGTGCTTGCTCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTC 73917 Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909 || || || || || || || || || ||||| ||||||| || |||| | || Sbjct 73916 GGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATCTG 73857 Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969 |||||| || |||| || || ||||| ||||| || || ||||| || || || Sbjct 73856 AACTTCACCACTGAATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAA 73797 Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTG 5026 || || | ||| || || || ||||| | |||||| || ||| || ||||||| Sbjct 73796 GAATGCGAGAACGTGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCCAGTC 73737 Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086 | | | ||| || | ||||||| ||||| | ||||| || || || || |||||||| Sbjct 73736 GTGGAGATCCTTTGACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCTTTTTT 73677 Query 5087 GTACAT 5092 |||||| Sbjct 73676 GTACAT 73671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047382811858