Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_030656.1
Length=133492
Score E
Sequences producing significant alignments: (Bits) Value
seq35 136 3e-27
>seq35
Length=307329
Score = 136 bits (150), Expect = 3e-27
Identities = 574/906 (63%), Gaps = 68/906 (8%)
Strand=Plus/Minus
Query 4248 ACACCAAATTTTTGGTATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAAC 4307
|||||| |||||||| || |||| |||||||||||| ||||| ||||| | ||
Sbjct 74569 ACACCAGCCTTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTAGTCTTGCCGGCCAAG 74510
Query 4308 GAAATATTTTCCATAAAATCAAACGGATTAGTTGCGTTGTAATGTTTTTC---ACACTTT 4364
||||| || ||||| || ||||| || || | | ||||| ||| || || |
Sbjct 74509 GAAATGTTCTCCATGAAGTCAAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCC--- 74453
Query 4365 AGAGCTACAAGCAATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTA 4424
| ||| | || | || ||||| || ||||| || || || ||||||| | ||||
Sbjct 74452 AAAGCGATGAGGAGACGATCAGCAACGAATTCGATGTATTGCTTCATGAGGGTGGAGTTC 74393
Query 4425 ATTCCAATTA-ATCTCACAGGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGC 4483
|| || | | | | || ||| || || | ||||| || ||||| || || | |||||
Sbjct 74392 ATGCCCAAAAGAGCACA-AGGAAGAGCCTCGGTCAAGAATTCTTGCTCAATTGCGACGGC 74334
Query 4484 TTCTGTGATTATATCTTTTATTTTATCTTTAGATGGT---TTATTTACTAAGTATCCAAA 4540
|| ||||| | |||| | | || ||||| | || | | | ||
Sbjct 74333 CTCGGTGATAACGTCTTGGACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAG---AA 74277
Query 4541 CAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAA 4600
| | || || ||||| || | ||||||||| | | || |||||||| || ||
Sbjct 74276 GAGGAGGCATGCGAAATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAA 74217
Query 4601 CGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGA 4660
|| | ||||| ||| | ||| | ||| || ||||| || |||| ||| || || || ||
Sbjct 74216 GGTGAGTCCGGCCATAAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGA 74157
Query 4661 AAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTT 4720
||||| |||||||| ||||| || || || || | || | || | | | ||
Sbjct 74156 GAAGAAGATGCCTTCAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTT 74097
Query 4721 GTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAA---------T 4771
|||| ||||||||| | ||||||| || || ||||| | ||| |||| |
Sbjct 74096 ATCTTGAATCCATTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGT 74037
Query 4772 TGT--GT-------ATATAGCGTTAAATAATT------TACTTTTTTCAAATG------- 4809
||| || || || | | || ||| |||| | |||| |
Sbjct 74036 TGTTAGTTGAATTCATGTAACAATGTATGATTGTAACCTACTGGTATCAATAGCATTGAA 73977
Query 4810 --GGT------------CTTGA------ATATAAGTGTCTATTAGTAGGCTATACATTTC 4849
||| |||| ||||| ||||| || || || || ||||
Sbjct 73976 GAGGTATGTCTTTTGTGCTTGCTCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTC 73917
Query 4850 AGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTG 4909
|| || || || || || || || || ||||| ||||||| || |||| | ||
Sbjct 73916 GGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATCTG 73857
Query 4910 AACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAA 4969
|||||| || |||| || || ||||| ||||| || || ||||| || || ||
Sbjct 73856 AACTTCACCACTGAATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAA 73797
Query 4970 AAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTG 5026
|| || | ||| || || || ||||| | |||||| || ||| || |||||||
Sbjct 73796 GAATGCGAGAACGTGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTGTTCCAGTC 73737
Query 5027 GGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTT 5086
| | | ||| || | ||||||| ||||| | ||||| || || || || ||||||||
Sbjct 73736 GTGGAGATCCTTTGACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCTTTTTT 73677
Query 5087 GTACAT 5092
||||||
Sbjct 73676 GTACAT 73671
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 427047382811858
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |