Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017-
05-31] 426 sequences; 43,974,967 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq38 349 5e-91
seq35 122 1e-22
>seq38
Length=269250
Score = 349 bits (386), Expect = 5e-91
Identities = 1314/2037 (65%), Gaps = 53/2037 (3%)
Strand=Plus/Minus
Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871
||||||| ||||||||| || || || | ||||| |||| || ||||||||| |
Sbjct 57097 GTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGAT 57038
Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931
|| | ||| ||||||| || ||||| ||||| || ||| |||||| |||
Sbjct 57037 GTAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCAATG 56978
Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991
|| || || | |||||| ||||||| | ||| || ||| | |||||||||| |||
Sbjct 56977 AATGCACCACGATCAGCAGCCATTTGAACAATTGTTCGTTGGGAGATTTCCCAAACAGTC 56918
Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048
||| ||| ||||| ||| |||||| || | ||||||||||||| ||||||||
Sbjct 56917 TTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCA 56858
Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108
| || || ||||| |||| ||| ||| | | | || | | | ||
Sbjct 56857 GCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGA 56798
Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168
|| |||||||| | ||| |||||||| | | || | ||||| ||| || ||
Sbjct 56797 AGCCATGGATTAACGACTTGGAATTCTCCGGCAAGAACACGACGAGAGTAGATGTTTGAA 56738
Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228
|| || ||||| | | |||| ||| || | |||||| | || |||||| ||||||
Sbjct 56737 GTGTAAGGTTCGAAACATTCGTTGAAGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATA 56678
Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288
||||| || | | | || | || || ||| |||| | || | | | | |
Sbjct 56677 GGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCC 56618
Query 77289 CAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA 77348
|||||||| | ||| | |||| ||| |||| | ||||||||| || || |||
Sbjct 56617 CAATCCCACAAATCAGTAGGTGTAACCCCCCACATATCGTATTGAAGTTCACCCTTAGAG 56558
Query 77349 GCATATGATCCATTATATGTTTCATAAGGTCC---TTCTGTTTC-AGCTAGTTCACAACT 77404
| || || | ||| ||||| || || || ||| || | | || | | ||
Sbjct 56557 ACTGGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGA-CGGAAGA 56499
Query 77405 CGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 77464
| ||| || ||| || || || |||||||| | | ||||| | || |||||
Sbjct 56498 GGT---CAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTC 56442
Query 77465 AATACTATCAAACGGATAATGTAAAAG--AATAAAGGCATCTGCTAATCCCTGAACTCCA 77522
| ||||| ||| | | || || || |||| |||| || | || ||||| |||
Sbjct 56441 TGGAGAGTCAAATGGAAGACG-AAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCA 56384
Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582
| | | ||||||| ||| | |||| || || |||| | ||||| || ||
Sbjct 56383 ACAGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCCTCTGCGACTGGATAGTAGTTG 56324
Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGA 77642
||||| ||||| ||||| | ||||||||||| |||| || || || | || || |
Sbjct 56323 ATGTCAATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGG 56264
Query 77643 AAATCAAATCTTCCATCTATAAC-------AAACATGTTCAAAGCTATAGATGCTAGATT 77695
|||||| | |||| || | | ||| || | ||||| || || || | ||
Sbjct 56263 AAATCATAAGTTCCCTCATTCATGTTGACGAAAGTTGGT-AAAGCGATGGAAGCCAAGTT 56205
Query 77696 ACAAACTGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACT 77752
||| || ||||||| | || ||| || | | || || || || | |||
Sbjct 56204 ACAGCAAGCAACCTCATCTG-GT--GCAGAGTACTCAACGATTTCTGTGCACAAATTGGA 56148
Query 77753 ACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAG 77812
| ||||| ||||| || | |||||||||||| || ||||||| ||||| |||||
Sbjct 56147 GCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAG 56088
Query 77813 AATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC 77872
|| || ||| | ||||| || | || | || | ||| || | ||| | | |||
Sbjct 56087 CATGAAGGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGC 56028
Query 77873 TTTTATCATAGATTTGTATC----GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTC 77926
|| || || ||| | |||| || |||| || ||| | |||| ||
Sbjct 56027 CTTGAT---AGTCTTGCGACCCTTGCCTGCCT-TTTCGTAACCCTCGTAGAGAGCC--TC 55974
Query 77927 AAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCA 77986
|| || || || ||||||| | || || || ||||| || |||||||| | | |||
Sbjct 55973 GAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCA 55914
Query 77987 GTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 78046
|| |||| | | ||| || ||||| || |||||||| ||||| | || || ||
Sbjct 55913 ATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAG 55854
Query 78047 ATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAAT 78106
||| || | | | |||||| || || ||| || ||||| || ||||| | ||
Sbjct 55853 ATCGCGTGCACGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAAC 55794
Query 78107 ATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTG 78166
||| | ||||||||| || || || | || | | ||||| || |||||||| || ||
Sbjct 55793 ATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTG 55734
Query 78167 ATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGT 78226
||| | ||||||||| ||||| || |||||| | ||| |||| ||||||||||| |
Sbjct 55733 ATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATACCGTTAGAGTT 55674
Query 78227 TCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTAT 78286
||| || || || | ||| || ||| | || || || |||| | || ||
Sbjct 55673 TCCGTTGGTACCGGCAATGTATGCGCCAGTAGCACGGATTCGGTGAATGTTGAGACCAAT 55614
Query 78287 TCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346
|| || || |||| || || | ||| ||| ||||| |||||||| ||||| || ||
Sbjct 55613 ACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAAT 55554
Query 78347 ACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGC 78406
|||||| ||| |||||| | ||| || || || | ||| || ||| || ||
Sbjct 55553 ACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGC 55494
Query 78407 ATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466
| || | ||| || || ||||| || || | || | || | | |||||||||||
Sbjct 55493 AGAGAAGAGTGTTGGCGAGGCATGTGTGAAGTACTTGTTTGACATCAAGTTGTATGTTTC 55434
Query 78467 AATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCT 78525
||||| ||| || || || | ||||| || || || |||||||| | ||| || |
Sbjct 55433 GATAGCACTTTCAATATCATCACCG-TGAATACCAACGGCAACACGCATGATCATTTGTT 55375
Query 78526 GAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAA 78585
| || | ||| | || || | | | |||||| || | |||||| |
Sbjct 55374 GTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAAGGTATGAACGCTCGAGAGTTTTGA 55315
Query 78586 AACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATC 78643
| ||||| || | || ||||| |||| ||||| | ||| ||||||| |||| ||
Sbjct 55314 ATCCAAAGTATTGATAGTTGAAA--TCTCGGTCGTAGACAATGGCAGAATTGAGTTCCTC 55257
Query 78644 TTTGTATTTGGTAACAATATCCATGACAG--TAGTTG-AAATAATAGGAGATCGTACACC 78700
| | | | ||||| || || || | ||| ||| ||||||||| | ||
Sbjct 55256 CTCATGTCTCATAACACATTC---GAAAGTTTCCTTGCTAATCATAGGAGATGCTGTGCC 55200
Query 78701 ATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGT 78760
|||| | || || ||| | ||||||| || || | || |||| || ||
Sbjct 55199 ATTTCTGGGGTTTGTATACTGGTATAAATCGCGAATAACGTGCGAGAACTGTTTCTTGGT 55140
Query 78761 TTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817
|| ||||| || || || || || || | ||||||||||| |||||||| |||||
Sbjct 55139 TTGTTTGTGGAGGTTGGAGACTGCAATACGAGCAGCTAGAATGGCATAATCGGGATG 55083
>seq35
Length=307329
Score = 122 bits (134), Expect = 1e-22
Identities = 230/334 (69%), Gaps = 7/334 (2%)
Strand=Plus/Minus
Query 48363 GTTTCTATAGCATTAAAGAGAAA-Gtttttt-tCATTGCTATCTTTAACGTAAGTATCTA 48420
|| || |||||||| ||||| | || |||| | ||||| | || | || || || |
Sbjct 73993 GTATCAATAGCATTGAAGAGGTATGTCTTTTGTGCTTGCT--CCTTGATATATGTGTCGA 73936
Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480
| | |||| || ||||||||||||| || || || || || || ||||| || |
Sbjct 73935 TGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 73876
Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540
||| || |||| |||||| || || || ||||| ||| |||| ||||| || || |
Sbjct 73875 ATCGTGCCTCTGGGATCTGAACTTCACCACTGAATCGCTCAACCAAGTTCTCGTTGACAA 73816
Query 48541 TTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAG 48600
|||| || || || || ||||| | || || || || || |||| |
Sbjct 73815 TTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAACGCTCGTCATCAT 73756
Query 48601 TCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 48657
| ||| || |||||||| | || ||| ||||| | ||| | ||||| || ||||| |
Sbjct 73755 TGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCTTCTGCGGTCCAGA 73696
Query 48658 ATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691
| ||||||||||||||||| ||||| | ||| ||
Sbjct 73695 AAGATGCCTCTGCTTTTTTGTACATCTGCCAGAT 73662
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694665100888640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |