Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq38 349 5e-91 seq35 122 1e-22 >seq38 Length=269250 Score = 349 bits (386), Expect = 5e-91 Identities = 1314/2037 (65%), Gaps = 53/2037 (3%) Strand=Plus/Minus Query 76812 GTACGTAGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTT 76871 ||||||| ||||||||| || || || | ||||| |||| || ||||||||| | Sbjct 57097 GTACGTAAATAGTACATTCCGGTCTTCAAACCCAATTTCCAACCAGCAAAATGCATGGAT 57038 Query 76872 GTCAGTTTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATG 76931 || | ||| ||||||| || ||||| ||||| || ||| |||||| ||| Sbjct 57037 GTAATCTTGCCCATTGTAGGATCCTTCATGTGAATGTTCATTGATTGAGATTGATCAATG 56978 Query 76932 AAAGCTCCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTT 76991 || || || | |||||| ||||||| | ||| || ||| | |||||||||| ||| Sbjct 56977 AATGCACCACGATCAGCAGCCATTTGAACAATTGTTCGTTGGGAGATTTCCCAAACAGTC 56918 Query 76992 TTGAAAACTTGTTTGATATCATCTGGAAGGTTTG---TATTTTGAATGGAACCACCATCT 77048 ||| ||| ||||| ||| |||||| || | ||||||||||||| |||||||| Sbjct 56917 TTGTAAAGAGCCTTGATGTCAGCTGGAATATTGGGGATATTTTGAATGGATCCACCATCA 56858 Query 77049 GATATAATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGG 77108 | || || ||||| |||| ||| ||| | | | || | | | || Sbjct 56857 GCAATGATACGGTTCTTCATATTGTCAGACCAGAGACCCATATCGACAAGGTCCTTGAGA 56798 Query 77109 AGATGAGGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTG 77168 || |||||||| | ||| |||||||| | | || | ||||| ||| || || Sbjct 56797 AGCCATGGATTAACGACTTGGAATTCTCCGGCAAGAACACGACGAGAGTAGATGTTTGAA 56738 Query 77169 GTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATA 77228 || || ||||| | | |||| ||| || | |||||| | || |||||| |||||| Sbjct 56737 GTGTAAGGTTCGAAACATTCGTTGAAGCCAAGAATTTGGGATGTGCTAGCAGTAGGCATA 56678 Query 77229 GGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTC 77288 ||||| || | | | || | || || ||| |||| | || | | | | | Sbjct 56677 GGTGCAACTAGGAGAGAGTTGCGGATTCCGTGTTGCTTGATGGATTGCTTCAAAGAGTCC 56618 Query 77289 CAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTA 77348 |||||||| | ||| | |||| ||| |||| | ||||||||| || || ||| Sbjct 56617 CAATCCCACAAATCAGTAGGTGTAACCCCCCACATATCGTATTGAAGTTCACCCTTAGAG 56558 Query 77349 GCATATGATCCATTATATGTTTCATAAGGTCC---TTCTGTTTC-AGCTAGTTCACAACT 77404 | || || | ||| ||||| || || || ||| || | | || | | || Sbjct 56557 ACTGGGGAGCCTTGATAGGTTTCGTATGGGCCAAGTTCCTTTGCGATCTCGA-CGGAAGA 56499 Query 77405 CGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTC 77464 | ||| || ||| || || || |||||||| | | ||||| | || ||||| Sbjct 56498 GGT---CAAGGCAGCGTGGTAGATGGTCTCGAAAATTTGTATGTTGAGGTGTTTGGCTTC 56442 Query 77465 AATACTATCAAACGGATAATGTAAAAG--AATAAAGGCATCTGCTAATCCCTGAACTCCA 77522 | ||||| ||| | | || || || |||| |||| || | || ||||| ||| Sbjct 56441 TGGAGAGTCAAATGGAAGACG-AAGAGCCAAGAAAG-CATCAGCAAGACCTTGAACACCA 56384 Query 77523 ATACCAATAGGTCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTA 77582 | | | ||||||| ||| | |||| || || |||| | ||||| || || Sbjct 56383 ACAGCGATAGGTCGATGACGGAAATTGCTTTTTCGGGCCTCTGCGACTGGATAGTAGTTG 56324 Query 77583 ATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTCCTTTAGTTTAAGA 77642 ||||| ||||| ||||| | ||||||||||| |||| || || || | || || | Sbjct 56323 ATGTCAATAATCTTATTCAAGTTTCTAACAACAACTTGGACAACCTCGTGAAGCTTTTGG 56264 Query 77643 AAATCAAATCTTCCATCTATAAC-------AAACATGTTCAAAGCTATAGATGCTAGATT 77695 |||||| | |||| || | | ||| || | ||||| || || || | || Sbjct 56263 AAATCATAAGTTCCCTCATTCATGTTGACGAAAGTTGGT-AAAGCGATGGAAGCCAAGTT 56205 Query 77696 ACAAACTGCTACCTCATTAGCGTTGGCA---TATTGTATTATCTCGGTACATAGATTACT 77752 ||| || ||||||| | || ||| || | | || || || || | ||| Sbjct 56204 ACAGCAAGCAACCTCATCTG-GT--GCAGAGTACTCAACGATTTCTGTGCACAAATTGGA 56148 Query 77753 ACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAG 77812 | ||||| ||||| || | |||||||||||| || ||||||| ||||| ||||| Sbjct 56147 GCTGCGAATAGTACCCAGGTTCTTTTGGTTGCTCTTCTTGTTGCATGCATCCTTGTAAAG 56088 Query 77813 AATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAGC 77872 || || ||| | ||||| || | || | || | ||| || | ||| | | ||| Sbjct 56087 CATGAAGGGATTTCCGGTCTCGGTTTGAGCCTCAAGAATGGAGTACCAAAGTTTTTGAGC 56028 Query 77873 TTTTATCATAGATTTGTATC----GCCTCTCTCTTTCATATTGA--GTATATAGCCGTTC 77926 || || || ||| | |||| || |||| || ||| | |||| || Sbjct 56027 CTTGAT---AGTCTTGCGACCCTTGCCTGCCT-TTTCGTAACCCTCGTAGAGAGCC--TC 55974 Query 77927 AAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCA 77986 || || || || ||||||| | || || || ||||| || |||||||| | | ||| Sbjct 55973 GAACTCCTCGCCATAAACATCTGCTAAACCTGGACATTCGTTGGGGCACATGAGAGTCCA 55914 Query 77987 GTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAG 78046 || |||| | | ||| || ||||| || |||||||| ||||| | || || || Sbjct 55913 ATCCCCATTCTTTTCAACACGCTTCATGAATAGATCAGGAATCCACAAGGCGTAGAAGAG 55854 Query 78047 ATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAAT 78106 ||| || | | | |||||| || || ||| || ||||| || ||||| | || Sbjct 55853 ATCGCGTGCACGAACTTCTTCTTTGCCATGATTTTTGCGTAGATCAAGGAACTCAAAAAC 55794 Query 78107 ATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTG 78166 ||| | ||||||||| || || || | || | | ||||| || |||||||| || || Sbjct 55793 ATCCGCATGCCATGGCTCAAGGTAAACAGCAAAGGCACCAGGACGCTTATTACCACCTTG 55734 Query 78167 ATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGT 78226 ||| | ||||||||| ||||| || |||||| | ||| |||| ||||||||||| | Sbjct 55733 ATCAACATATCTGGCAGTGTTGTTGAAAACTCGGAGCATAGGAACGATACCGTTAGAGTT 55674 Query 78227 TCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTAT 78286 ||| || || || | ||| || ||| | || || || |||| | || || Sbjct 55673 TCCGTTGGTACCGGCAATGTATGCGCCAGTAGCACGGATTCGGTGAATGTTGAGACCAAT 55614 Query 78287 TCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTAT 78346 || || || |||| || || | ||| ||| ||||| |||||||| ||||| || || Sbjct 55613 ACCACCGGCATTCTTTGAGATCATAGCACAAATCTTCAAAGTATCGTAAATACCATCAAT 55554 Query 78347 ACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGC 78406 |||||| ||| |||||| | ||| || || || | ||| || ||| || || Sbjct 55553 ACTGTCCTCCTTCATGTCGATAAGGAAGCATGATGAAAGTTGTGCTTGTGGAGTACCCGC 55494 Query 78407 ATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTC 78466 | || | ||| || || ||||| || || | || | || | | ||||||||||| Sbjct 55493 AGAGAAGAGTGTTGGCGAGGCATGTGTGAAGTACTTGTTTGACATCAAGTTGTATGTTTC 55434 Query 78467 AATAGCTGATTCTATGTC-CCATTGATGAATTCCTACCGCTACACGCATCAACATATGCT 78525 ||||| ||| || || || | ||||| || || || |||||||| | ||| || | Sbjct 55433 GATAGCACTTTCAATATCATCACCG-TGAATACCAACGGCAACACGCATGATCATTTGTT 55375 Query 78526 GAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAA 78585 | || | ||| | || || | | | |||||| || | |||||| | Sbjct 55374 GTGGACGTTCTGCAACTTTGCCATCAAGACGTAGAAGGTATGAACGCTCGAGAGTTTTGA 55315 Query 78586 AACCAAAATAGTTGTA--TGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTATC 78643 | ||||| || | || ||||| |||| ||||| | ||| ||||||| |||| || Sbjct 55314 ATCCAAAGTATTGATAGTTGAAA--TCTCGGTCGTAGACAATGGCAGAATTGAGTTCCTC 55257 Query 78644 TTTGTATTTGGTAACAATATCCATGACAG--TAGTTG-AAATAATAGGAGATCGTACACC 78700 | | | | ||||| || || || | ||| ||| ||||||||| | || Sbjct 55256 CTCATGTCTCATAACACATTC---GAAAGTTTCCTTGCTAATCATAGGAGATGCTGTGCC 55200 Query 78701 ATTTTTAGGATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGT 78760 |||| | || || ||| | ||||||| || || | || |||| || || Sbjct 55199 ATTTCTGGGGTTTGTATACTGGTATAAATCGCGAATAACGTGCGAGAACTGTTTCTTGGT 55140 Query 78761 TTCCTTGTGTAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG 78817 || ||||| || || || || || || | ||||||||||| |||||||| ||||| Sbjct 55139 TTGTTTGTGGAGGTTGGAGACTGCAATACGAGCAGCTAGAATGGCATAATCGGGATG 55083 >seq35 Length=307329 Score = 122 bits (134), Expect = 1e-22 Identities = 230/334 (69%), Gaps = 7/334 (2%) Strand=Plus/Minus Query 48363 GTTTCTATAGCATTAAAGAGAAA-Gtttttt-tCATTGCTATCTTTAACGTAAGTATCTA 48420 || || |||||||| ||||| | || |||| | ||||| | || | || || || | Sbjct 73993 GTATCAATAGCATTGAAGAGGTATGTCTTTTGTGCTTGCT--CCTTGATATATGTGTCGA 73936 Query 48421 TTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCATCTGAAATCCGTAAAAAC 48480 | | |||| || ||||||||||||| || || || || || || ||||| || | Sbjct 73935 TGAGAAGAGAGTATGTTTCGGAGTGAATGTTCTCCATCATGATTTGGAAACCGTAGAAGC 73876 Query 48481 ATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCAGCCAAATTCTCATTTACTA 48540 ||| || |||| |||||| || || || ||||| ||| |||| ||||| || || | Sbjct 73875 ATCGTGCCTCTGGGATCTGAACTTCACCACTGAATCGCTCAACCAAGTTCTCGTTGACAA 73816 Query 48541 TTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAAAATATTTTTCGTTGGAAG 48600 |||| || || || || ||||| | || || || || || |||| | Sbjct 73815 TTCCGTCTGATGCGGCGAAGAATGCGAGAACGTGGGAGATGAAGTAACGCTCGTCATCAT 73756 Query 48601 TCAGT---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAA 48657 | ||| || |||||||| | || ||| ||||| | ||| | ||||| || ||||| | Sbjct 73755 TGAGTCTGTTGTTCCAGTCGTGGAGATCCTTTGACAAATCAATCTCTTCTGCGGTCCAGA 73696 Query 48658 ATGATGCCTCTGCTTTTTTATACATATTCCATAT 48691 | ||||||||||||||||| ||||| | ||| || Sbjct 73695 AAGATGCCTCTGCTTTTTTGTACATCTGCCAGAT 73662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694665100888640