Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Myriosclerotinia_20scirpicola_20[genbank_20GCA_5F002162505.1_202017- 05-31] 426 sequences; 43,974,967 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq38 343 2e-89 seq35 145 1e-29 >seq38 Length=269250 Score = 343 bits (380), Expect = 2e-89 Identities = 1327/2064 (64%), Gaps = 47/2064 (2%) Strand=Plus/Minus Query 75377 GTGAACTGAATGGGAGAGGATGCTGGTTTTGTACGTAGATAGTACATACCAGTTTTTAGA 75436 ||||| ||||| || | || || | | ||||||| ||||||||| || || || | | Sbjct 57127 GTGAATTGAATAGGTGCTGAGGCAGCCATAGTACGTAAATAGTACATTCCGGTCTTCAAA 57068 Query 75437 CCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGTTTGGAATAACTCGGATCGGCTATA 75496 |||| |||| || ||||||||| ||| | ||| | ||||| || Sbjct 57067 CCCAATTTCCAACCAGCAAAATGCATGGATGTAATCTTGCCCATTGTAGGATCCTTCATG 57008 Query 75497 TGAATATTCATCGACTGACTTTGATCGATGAAAGCTCCTCTATCAGCCGCCATTTTTATA 75556 ||||| ||||| || ||| |||||| ||||| || || | |||||| ||||||| | | Sbjct 57007 TGAATGTTCATTGATTGAGATTGATCAATGAATGCACCACGATCAGCAGCCATTTGAACA 56948 Query 75557 ATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAAACTTGTTTGATATCATCTGGAAGA 75616 || || ||| | |||||||||| ||| ||| ||| ||||| ||| |||||| | Sbjct 56947 ATTGTTCGTTGGGAGATTTCCCAAACAGTCTTGTAAAGAGCCTTGATGTCAGCTGGAATA 56888 Query 75617 TTTG---TATTTTGAATGGATCCGCCATCAGATATAATTGTATTCTTGATCTCATCATTC 75673 || | |||||||||||||||| ||||||| || || ||||| || | ||| | Sbjct 56887 TTGGGGATATTTTGAATGGATCCACCATCAGCAATGATACGGTTCTTCATATTGTCAGAC 56828 Query 75674 CACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACAATTTGAAATTCTCCA 75733 || | | ||| | | | || || |||||||| | ||| |||||||| Sbjct 56827 CAGAGACCCATATCGACAAGGTCCTTGAGAAGCCATGGATTAACGACTTGGAATTCTCCG 56768 Query 75734 GACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCC 75793 | | || | |||| ||| || || || || ||||| | | |||| ||| || Sbjct 56767 GCAAGAACACGACGAGAGTAGATGTTTGAAGTGTAAGGTTCGAAACATTCGTTGAAGCCA 56708 Query 75794 AAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTGAGACCA 75853 | |||||| | || |||||| ||||||||||| || | | | || | || || Sbjct 56707 AGAATTTGGGATGTGCTAGCAGTAGGCATAGGTGCAACTAGGAGAGAGTTGCGGATTCCG 56648 Query 75854 TGTGTTCTGATTTTATCTTTTAGATATTTCCAATCCCAAAGATCTGATGGTACAACATCC 75913 ||| |||| | || | | | | ||||||||| | ||| | ||| ||| || Sbjct 56647 TGTTGCTTGATGGATTGCTTCAAAGAGTCCCAATCCCACAAATCAGTAGGTGTAACCCCC 56588 Query 75914 CAGAGATCGTATTGTAGAATTCCGTTGCTAGCATATGATCCATTATATGTTTCGTAAGTC 75973 || | ||||||||| || || || | || || | ||| |||||||| | Sbjct 56587 CACATATCGTATTGAAGTTCACCCTTAGAGACTGGGGAGCCTTGATAGGTTTCGTATGGG 56528 Query 75974 CCG---TCCTTTTC-AGCTAGTTCGCAACTCGCCTCTAACGCACCGTAATAAATTGTTTC 76029 || |||||| | | || | || || | | || ||| ||| || || || || Sbjct 56527 CCAAGTTCCTTTGCGATCTCGA-CGGAAGAGGTC---AAGGCAGCGTGGTAGATGGTCTC 56472 Query 76030 GAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCAAAAGGATAATGTAAAAG--A 76087 |||||| | | || || | || ||||| || ||||| ||| | | || || | Sbjct 56471 GAAAATTTGTATGTTGAGGTGTTTGGCTTCTGGAGAGTCAAATGGAAGACG-AAGAGCCA 56413 Query 76088 ATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAA 76147 | ||| ||||| || || || ||||| |||| | | ||||||| ||| | |||| Sbjct 56412 AGAAA-GCATCAGCAAGACCTTGAACACCAACAGCGATAGGTCGATGACGGAAATTGCTT 56354 Query 76148 ATTTCAGCTTCTGGAATAGGGTAATAATTAATATCTATAATTTTATTGAGATTTCTGACA 76207 || || |||| | || || || || || || ||||| ||||| | ||||| ||| Sbjct 56353 TTTCGGGCCTCTGCGACTGGATAGTAGTTGATGTCAATAATCTTATTCAAGTTTCTAACA 56294 Query 76208 ACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAATTTTCCATCTATCAC------- 76260 || |||| || || || | || || | |||||| | |||| || ||| Sbjct 56293 ACAACTTGGACAACCTCGTGAAGCTTTTGGAAATCATAAGTTCCCTCATTCATGTTGACG 56234 Query 76261 AAACATATTAAGAGCTATAGATGCTAGATTACAAACGGCTACCTCATTAGCATTGGCATA 76320 ||| | ||| ||| || || || | ||||| || ||||||| | | || Sbjct 56233 AAAGTTGGTAA-AGCGATGGAAGCCAAGTTACAGCAAGCAACCTCATCTGGTGCAGAGTA 56175 Query 76321 TTGTATTATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCT 76380 | | || || ||||| | ||| | ||||| || || || | ||||||||| Sbjct 56174 CTCAACGATTTCTGTGCACAAATTGGAGCTGCGAATAGTACCCAGGTTCTTTTGGTTGCT 56115 Query 76381 CTTTTTGTTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTC 76440 ||| ||||| |||| ||||| ||||| | || ||| |||| || || | || | || Sbjct 56114 CTTCTTGTTGCATGCATCCTTGTAAAGCATGAAGGGATTTCCGGTCTCGGTTTGAGCCTC 56055 Query 76441 GATAATAGATTTCCAGACGACTCTAGCTTTTATTATAGATTTGTATCGCTTCTCTC---T 76497 | ||| || | ||| | | ||| || || || ||| | ||| || | Sbjct 56054 AAGAATGGAGTACCAAAGTTTTTGAGCCTTGAT---AGTCTTGCGACCCTTGCCTGCCTT 55998 Query 76498 TTCATATTGT--GTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACCAGGA 76555 ||| || ||| | | || || || || || || ||||||| | ||||| ||| Sbjct 55997 TTCGTAACCCTCGTAGAGAGCC--TCGAACTCCTCGCCATAAACATCTGCTAAACCTGGA 55940 Query 76556 CATTCATTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGA 76615 ||||| || || ||||| | | ||| || |||| | | ||| || ||||| || ||| Sbjct 55939 CATTCGTTGGGGCACATGAGAGTCCAATCCCCATTCTTTTCAACACGCTTCATGAATAGA 55880 Query 76616 TCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTC 76675 ||||| ||||| | || || ||||| || | | | |||||| || || ||| Sbjct 55879 TCAGGAATCCACAAGGCGTAGAAGAGATCGCGTGCACGAACTTCTTCTTTGCCATGATTT 55820 Query 76676 TTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATATCGCCATA 76735 || ||||| |||||||| | || ||| | ||||||||| || || || | || | Sbjct 55819 TTGCGTAGATCAAGGAACTCAAAAACATCCGCATGCCATGGCTCAAGGTAAACAGCAAAG 55760 Query 76736 ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTC 76795 |||| || || |||||||| || ||||| | ||||||||||||||| || |||||| Sbjct 55759 GCACCAGGACGCTTATTACCACCTTGATCAACATATCTGGCAGTGTTGTTGAAAACTCGG 55700 Query 76796 AACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCA 76855 | ||| |||| || |||||||| | || || || || | ||| || ||| ||| Sbjct 55699 AGCATAGGAACGATACCGTTAGAGTTTCCGTTGGTACCGGCAATGTATGCGCCAGTAGCA 55640 Query 76856 CGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT 76915 || || ||| || || || || || || | || ||||| | |||||| Sbjct 55639 CGGATTCGGTGAATGTTGAGACCAATACCACCGGCATTCTTTGAGATCATAGCACAAATC 55580 Query 76916 TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 ||||| || || || || || || ||||| || ||| |||||| | ||| || || Sbjct 55579 TTCAAAGTATCGTAAATACCATCAATACTGTCCTCCTTCATGTCGATAAGGAAGCATGAT 55520 Query 76976 GACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCAT 77035 || | ||| || ||| || ||| || | ||| || || ||||| ||||| | Sbjct 55519 GAAAGTTGTGCTTGTGGAGTACCCGCAGAGAAGAGTGTTGGCGAGGCATGTGTGAAGTAC 55460 Query 77036 TTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC-CCATTGATGAATTCC 77094 || | || | | ||||||||||| ||| | ||| ||||| || | ||||| || Sbjct 55459 TTGTTTGACATCAAGTTGTATGTTTCGATAGCACTTTCAATATCATCACCG-TGAATACC 55401 Query 77095 TACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAA 77154 || || |||||||| | ||| || || || |||||| || || || | | Sbjct 55400 AACGGCAACACGCATGATCATTTGTTGTGGACGTTCTGCAACTTTGCCATCAAGACGTAG 55341 Query 77155 CAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTA--TGAAAAGTCTCTTTCG 77212 | |||||| || | |||||| || ||||| || | || ||||| |||| ||| Sbjct 55340 AAGGTATGAACGCTCGAGAGTTTTGAATCCAAAGTATTGATAGTTGAAA--TCTCGGTCG 55283 Query 77213 TAAATAATAACCGAATTTAGTTTGTCCTTATATTTGGTAACAATATCCATGACAGT---G 77269 || | ||| | ||||| |||| |||| || | | ||||| || || ||| Sbjct 55282 TAGACAATGGCAGAATTGAGTTCCTCCTCATGTCTCATAACACATTC---GAAAGTTTCC 55226 Query 77270 GTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTAACATAGTTAAATAAGTCTTCC 77329 | ||| || |||||| | | |||||| | || || ||| | |||| || Sbjct 55225 TTGCTAATCATAGGAGATGCTGTGCCATTTCTGGGGTTTGTATACTGGTATAAATCGCGA 55166 Query 77330 ATTACGTCGCTA-AATAGtttttttGTTTCCTTGTGTAGATTCGATACGGCTATTCTAGC 77388 || |||| || | || |||| || |||| ||||| || || || || || || | ||| Sbjct 55165 ATAACGT-GCGAGAACTGTTTCTTGGTTTGTTTGTGGAGGTTGGAGACTGCAATACGAGC 55107 Query 77389 AGCTAGAATTGCATAGTCAGGATG 77412 ||||||||| ||||| || ||||| Sbjct 55106 AGCTAGAATGGCATAATCGGGATG 55083 >seq35 Length=307329 Score = 145 bits (160), Expect = 1e-29 Identities = 572/904 (63%), Gaps = 67/904 (7%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| ||||| || | || ||||| || ||||| ||||| |||| || || || Sbjct 74560 TTTTGGTAATCACCAACTCTCTTTTCGAAGAAGTTAGTCTTGCCGGCCAAGGAAATGTTC 74501 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || ||||| || || | | || || | ||| | || || | | Sbjct 74500 TCCATGAAGTCAAATGGGTTGGCAGACTTGTAGACTTTGTCGTTACCCAAAGCGATGAGG 74441 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATGAGT 46518 || | ||| ||||||||||| || || ||||| | | ||||| || | || Sbjct 74440 AGACGATCAGCAACGAATTCGATGTATTGCTTCATGAGGGTGGAGTTCATGCCCAAAAGA 74381 Query 46519 TTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATC 46578 || |||||||| || | || ||||| ||||| | ||| || || | || | | Sbjct 74380 GCACAAGGAAGAGCCTCGGTCAAGAATTCTTGCTCAATTGCGACGGCCTCGGTGATAA-C 74322 Query 46579 GATGTT--ACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAA 46636 | | || || | || || ||| | ||| | | ||| || | | ||||| | Sbjct 74321 G-TCTTGGACGGCTTGCTTGGATGGGCGGTGCTTGAGATGGGAGAAGAGGAGGCATGCGA 74263 Query 46637 AATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCA 46696 |||| || || ||||| || | || | |||||| || || ||||| || | || Sbjct 74262 AATCGGTGTGGAGACCTTCGTCACGGGAGATGAGTTCGTTGGAGAAGGTGAGTCCGGCCA 74203 Query 46697 TTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTT 46756 | || |||||||| |||||||| || |||| ||||| ||||| || ||||| ||||||| Sbjct 74202 TAAGACCACGCTTCTTGAGCCAGAAGATAGAGGCGAAGGATCCGGAGAAGAAGATGCCTT 74143 Query 46757 CTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACC 46813 | || || |||||||||||||| | | | | ||| | |||| ||||||| Sbjct 74142 CAACGGCAGCGAATGCGACAAGACGTTGAGCAAAGGTGGAGTTCTTATCTTGAATCCA-- 74085 Query 46814 TTTGA--GCCCAATCAGCCTTTTTCTTTACACAAGGCA---------TTGTT-------- 46854 ||||| ||||| || ||||| ||||| | ||||| | ||||| Sbjct 74084 TTTGACAGCCCAGTCGGCCTTCTTCTTGATGCAAGGAACTATCAAGGTTGTTAGTTGAAT 74025 Query 46855 ----------------------------------TCTATAGCATTAAAGAGAAAGttttt 46880 || |||||||| ||||| | | || Sbjct 74024 TCATGTAACAATGTATGATTGTAACCTACTGGTATCAATAGCATTGAAGAGGTATGTCTT 73965 Query 46881 ttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTT 46940 || | || || | |||||| || || | |||| || |||| || |||||||| Sbjct 73964 TTGTGCTTGCTCCTTGATATATGTGTCGATGAGAAGAGAGTATGTTTCGGAGTGAATGTT 73905 Query 46941 TTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACA 47000 || || || || || ||||| || |||| ||| || | ||||| || || || Sbjct 73904 CTCCATCATGATTTGGAAACCGTAGAAGCATCGTGCCTCTGGGATCTGAACTTCACCACT 73845 Query 47001 AAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATAC 47060 ||||| ||| ||| ||||| || || ||||| || || || || ||||| | || Sbjct 73844 GAATCGCTCAACCAAGTTCTCGTTGACAATTCCGTCTGATGCGGCGAAGAATGCGAGAAC 73785 Query 47061 ATGTTTAATAAAATAT---TTTTCATCGGT-AGTCAGTTTATTCCAGTCATTGATATCTT 47116 || || || || | ||||| | |||| ||| |||||||| | || ||| | Sbjct 73784 GTGGGAGATGAAGTAACGCTCGTCATCATTGAGTCTGTTG-TTCCAGTCGTGGAGATCCT 73726 Query 47117 TTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCC 47176 |||| | ||| | ||||| || |||||||| || |||||||||||||| ||||| | || Sbjct 73725 TTGACAAATCAATCTCTTCTGCGGTCCAGAAAGATGCCTCTGCTTTTTTGTACATCTGCC 73666 Query 47177 ATAT 47180 | || Sbjct 73665 AGAT 73662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712930603624320