Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01] 189 sequences; 43,559,170 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq124 156 5e-33 >seq124 Length=2242402 Score = 156 bits (172), Expect = 5e-33 Identities = 507/786 (65%), Gaps = 61/786 (8%) Strand=Plus/Minus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 |||| || | ||||| ||| | || | | |||||||| |||||||| | |||||| Sbjct 1137837 ATTATACAGACATCTTCATCGCAATTGTCTTGTGGGGGTCGTAGCCCTTGATACCAAAGT 1137778 Query 145595 CCTCCGCCCTGAAGTCATCTATGT--CCTCCACCCGC-CTCAGGATCCTGAGC-CTGGGA 145650 |||| | | |||| ||| ||||| | | | | |||| ||| |||| | Sbjct 1137777 CCTCTAATTTCCATCCATCAATGCTACCTCCCTTCTCGCGCGAGATCTCGAGTTCTGGAA 1137718 Query 145651 AAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGAC 145709 | ||| | ||||| | || ||||| | || || | || ||||||| |||||| || Sbjct 1137717 ACTGGC--GAGGCTCACGTTCCAGCTGAATGTTGAGCGCGTCGACGTGGTCGAGGTACAC 1137660 Query 145710 GTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769 || ||||| |||| ||||||| | | | || ||| | | | || ||| || | Sbjct 1137659 ATGGGCGTCTCCCATGACGTGGGTAAGGCTACCAGGCACTAAATCACAGACGTGCGCAAG 1137600 Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829 ||||| ||||| | | |||||||| || ||||||||||| || || |||||||| | Sbjct 1137599 CATGTGAGTCAGTAACGCATAGCTGGCAATATTGAAGGGCACGCCGAGGCCCATGTCGCA 1137540 Query 145830 CGAGCGCTGGTACAGCTGGC-----AGGAGAGC-----------------------TCCC 145861 || || ||||||||||||| ||| | | || | Sbjct 1137539 GGACCGTTGGTACAGCTGGCAATGCAGGTGGCCCTGCGGCTTAGGCTCGTCCTCGGTCTC 1137480 Query 145862 CGCC--------------------CGCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGG 145901 ||| || || |||||||| | | || || ||||| Sbjct 1137479 TGCCTCGCGTTTTTGGCGCGGGTACGAGACATAGAACTGCGCGAACATATGACACGGCGG 1137420 Query 145902 CAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTC-T 145960 ||| |||| | | ||||| || ||||||||||| || |||| ||| | | | || | Sbjct 1137419 CAGCACCATCTTGCGGAGGTCGGCAGGGTTCCAGGCCGTAAGGATGAGACGGC-GATCGT 1137361 Query 145961 CGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGT 146020 |||||| || | || || || || || |||||| ||||| || || || Sbjct 1137360 GGGGGTTTGTCCGCAGCTTGTGGATGAGTTCGGCGATCTGGTCGACGCCTTGTCCTGTGT 1137301 Query 146021 AATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGG 146080 | ||||| |||||||| |||||| |||| || ||||||| |||||| |||||||| || | Sbjct 1137300 AGTCTGTATTGGAGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGAAACCCGTAAACAG 1137241 Query 146081 GCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACC 146140 | || ||||| ||| || | ||| || ||| | ||||||| || || || | Sbjct 1137240 GACCAAGGTCGCCGACTTCGCGATGCGTTAGACCGAGGTTGTCGAGGAACTCACGAGAGC 1137181 Query 146141 CGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTCATTGGAGTCCGTGGACCC 146198 |||| ||||||| ||||||| ||| | |||| ||| | || || ||| ||| || Sbjct 1137180 CGTTTCCGTCCCAAATCTTGATGCCGGCATCGCTGAG-GGTC-TTTGAGGAAGTGTTACC 1137123 Query 146199 CCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAG 146258 | |||||||||||| ||||| ||| ||| | | ||||| | ||||||||| || Sbjct 1137122 CTCGATGAACCAGAGAAGCTCGACGATGACGGCTCGTGTAAAGACGCGCTTGGTGGTGAG 1137063 Query 146259 CAGGGG 146264 ||||| Sbjct 1137062 GAGGGG 1137057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590075405943560