Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq134 96.9 7e-15
>seq134
Length=152861
Score = 96.9 bits (106), Expect = 7e-15
Identities = 180/259 (69%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| ||||| || |||||||||| || || ||| || || || || |||||
Sbjct 56980 CCGATGCCTCCTGCCATCTTGGAGATCATGGCACAAGTCTTGAGGGTGTCGTAGATACCG 56921
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905
|| ||||| || || | | | | | |||||||| || || || || || ||| | |
Sbjct 56920 TCGATGCTGTCTTCCTTCATGTCAACCAGGAAGCAGGAAGACAGCTGAGGC-TGAGGGGT 56862
Query 94906 CCACA-ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATA 94964
| | ||| ||||| || || ||||| || || || | || |||||||| | ||
Sbjct 56861 ACCCGCATTGAACAGGGTTGGTGAAGCGTGAGTGAACAGCTTGCTGGACATGAGGTTGTA 56802
Query 94965 TGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCACACGCATAATCA 95023
|| || | |||| | |||||| | | || || |||||||||| |||||||| ||||
Sbjct 56801 GGTCTCCAGGACACGCTCGATGTCGTCACCCCAGA-TGCCGACAGCGACACGCATGATCA 56743
Query 95024 TGTCCTGAGGGCGCTCAAC 95042
||| |||||| ||||||||
Sbjct 56742 TGTGCTGAGGTCGCTCAAC 56724
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989581603660495
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |