Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Neonectria_20ditissima_20[genbank_20GCA_5F001305495.1_202015-10-01]
189 sequences; 43,559,170 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq1 96.9 3e-15
>seq1
Length=5508434
Score = 96.9 bits (106), Expect = 3e-15
Identities = 162/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Plus
Query 139535 TGGCCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCG 139594
|| ||||| || | ||| | ||| | ||||| || ||||| || |||||||| |||||
Sbjct 3986521 TGACCGCCACGGAGACGGAGAACCAGGTGAAGGGTCGACTCCTTCTGAATGTTGTAATCA 3986580
Query 139595 CTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGA 139654
|||| |||| || || ||||| ||||||||| | || || || ||||| || ||
Sbjct 3986581 CTCAGGGTGCGACCATCCTCCAGCTGCTTACCAGCAAAAATAAGTCGCTGCTGGTCTGGG 3986640
Query 139655 GGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGT-TCCACTGTGTCGGTGGGCTC 139713
|| ||||| || ||||| ||| | || | || | | || | || || | | ||
Sbjct 3986641 GGGATGCCCTCCTTGTCT-TGAATCTTCGACTTGACATTGTCGATAGTATCAGAAGATTC 3986699
Query 139714 CACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCATA 139765
||||| | || | |||||||||||| | || || ||||| || ||||||
Sbjct 3986700 GACCTCGAGAGTAATCGTCTTGCCGGTGAGGGTCTTGACGAAAATCTGCATA 3986751
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496062828048800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |